Analytical Chemistry · 2005 · 161 citations · 8 references
Life SciencesBiochemistryMolecular BiologyGlycobiologyPost-translational ModificationProteomicsFunctional ProteomicsGlycoproteomicsO-linked GlycosylationPost-translational Modification AnalysisProtein GlycosylationProtein IdentificationCytosolic ProteomicsIdentificationImmunoprecipitation AssaysMetabolic Labeling StrategyN-acetylglucosamine LabelingO-glycan AnalysisO-linked N-acetylglucosamine ModificationProtein O-glycosylation
The O-linked N-acetylglucosamine (O-GlcNAc) modification of serine/threonine residues is an abundant posttranslational modification present in cytosolic and nuclear proteins. The functions and subproteome of O-GlcNAc modification remain largely undefined. Here we report the application of the tagging-via-substrate (TAS) approach for global identification of O-GlcNAc-modified proteins. The TAS method utilizes an O-GlcNAc azide analogue for metabolic labeling of O-GlcNAc-modified proteins, which can be chemoselectively conjugated for detection and enrichment of the proteins for proteomics studies. Our study led to the identification of 199 putative O-GlcNAc-modified proteins from HeLa cells, among which 23 were confirmed using reciprocal immunoprecipitation. Functional classification shows that proteins with diverse functions are modified by O-GlcNAc, implying that O-GlcNAc might be involved in the regulation of multiple cellular pathways.
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DAVID: Database for Annotation, Visualization, and Integrated Discovery
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Identifying biological themes within lists of genes with EASE
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