Genome Announcements · 2014 · 21 citations · 16 references
Life SciencesGeneticsMicrobiologyGenomicsMicrobial GenomicsSequence AnalysisComparative Microbial GenomicsDna SequencingEnvironmental GenomicsEnvironmental Microbial GenomicsMetagenome AssemblyMicrobial Genome StructureBacterial MatsGenome Annotation Of Environmental MicrobesMicrobial MatsProkaryotic Sequence AnnotationSprings
Microbial mats situated at the Manikaran hot springs (>95°C) are characterized by their high arsenic content (140 ppb), qualifying as a stressed niche. Here, we report the annotated draft genome (3.85 Mb) of Cellulosimicrobium sp. strain MM, isolated from these microbial mats, consisting of 3,718 coding sequences, with an average % G+C of 74.4%.
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The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.8K citations · Full text
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino, Ewan Birney · Genome Research · 2008 · 9.7K citations · Full text
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen, Peter F. Hallin, Einar Andreas Rødland et al. · Nucleic Acids Research · 2007 · 6.3K citations · Full text