Faraday Discussions · 2013 · 18 citations · 36 references
Natural SciencesChemistryPhysicsComputational ChemistryPhysical ChemistrySpectroscopyIntermolecular InteractionsMolecular BondingMolecular DynamicsMolecular SimulationMolecular ThermodynamicsRaman SpectroscopyCorrelationEquation Of State ParametersHydrogen BondingHydrogen Bonding ModelsMolecular Potential ModelsRaman SpectraSupercritical FluidsTemperature-dependent Raman Spectroscopy
Molecular dynamics (MD) studies of hydrogen bonding (H-bonding) in liquid, sub- and supercritical methanol have been performed in a wide range of thermodynamic parameters of state, using various potential models and two H-bond criteria. It was shown that there is the universal correlation between the average number of H-bonds per molecule (n(HB)) and the mole fraction of H-bonded molecules (X(HB)) for the studied thermodynamic parameters of state. The same feature was observed for the correlations between fractions of molecules forming one (f1), two (f2), three (f3) H-bonds and X(HB). These correlations served to fit experimental Raman spectra of methanol recorded under sub- and supercritical conditions. The advantage of the approach used here is that f1, f2, f3 values have a clear physical meaning and are dependent on the values of state parameters.
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A smooth particle mesh Ewald method
Ulrich Essmann, L. Perera, Max L. Berkowitz et al. · The Journal of Chemical Physics · 1995 · 22.9K citations
Scalable molecular dynamics with NAMD
J. C. Phillips, Rosemary Braun, Wei Wang et al. · Journal of Computational Chemistry · 2005 · 17.4K citations · Full text