Journal of Medicinal Chemistry · 2012 · 27 citations · 32 references
PharmacyMedicinal ChemistryPharmacologyDrug DiscoveryMolecular PharmacologyStructure-activity RelationshipsEnzyme InhibitionLigand BindingPeptide ChemistryPeptide Drug DiscoveryPotency OptimizationStructure-activity Relationship AnalysisActive Site InhibitorsHydrophobic InteractionsLuminescence-based AssaysLuminescence-based ScreeningPeptide Medicinal ChemistryPeptide Structure - Activity RelationshipsPeptide Structure-activity RelationshipsToxin Biochemistry
Several 7-peptide-substituted pterins were synthesized and tested as competitive active-site inhibitors of ricin toxin A (RTA). Focus began on dipeptide conjugates, and these results further guided the construction of several tripeptide conjugates. The binding of these compounds to RTA was studied via a luminescence-based kinetic assay, as well as through X-ray crystallography. Despite the relatively polar, solvent exposed active site, several hydrophobic interactions, most commonly π-interactions not predicted by modeling programs, were identified in all of the best-performing inhibitors. Nearly all of these compounds provide IC₅₀ values in the low micromolar range.
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Features and development of <i>Coot</i>
Paul Emsley, Bernhard Lohkamp, W. G. Scott et al. · Acta Crystallographica Section D Biological Crystallography · 2010 · 29.6K citations · Full text