The Journal of Chemical Physics · 2008 · 26 citations · 31 references
Life SciencesBiochemistryBiophysicsBiophysical ChemistryPhysical ChemistryStructural BiologyAlzheimer DiseaseAmyloid FormationMacromolecular AssemblyMolecular DynamicsProtein AggregationProtein OligomerizationAmyloid Beta AggregationAmyloid Beta PeptidesAmyloid Fibril FormationAmyloid Oligomer FormationImplicit Solvent ModelsOligomerization ThermodynamicsProtein Aggregation SimulationsSolvent Effects On Folding
Results from replica-exchange and regular room temperature molecular dynamics simulations of the Alzheimer's beta amyloid (Abeta(1-39)) monomer in an implicit solvent are reported. Our data indicate that at room temperature, the monomer assumes random-coil and soluble conformations. No beta content is observed which therefore seems to be a product of oligomerization and aggregation of monomers.
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Replica-exchange molecular dynamics method for protein folding
Yuji Sugita, Yuko Okamoto · Chemical Physics Letters · 1999 · 4.6K citations
Prediction of protein conformation
Peter Y. Chou, Gerald D. Fasman · Biochemistry · 1974 · 3.3K citations