Science · 2011 · 310 citations · 63 references
Life SciencesBotanyMicrobiologyMicrobial EcologyMicrobial TaxonomyMycologyFungal ClassificationFungal DiversityFungal EvolutionFungal SystematicsPlant-associated Microbial CommunitiesRhizosphere EcologyHabitat SpecificityMycorrhizal DiversityMycorrhizal Fungal DiversityRhizosphere Fungal CommunitiesRoot-associated Fungal CommunitiesRoot-associated FungiSaprotrophic Fungal DiversitySoil Fungal Diversity
Estimates suggest that only one-tenth of the true fungal diversity has been described. Among numerous fungal lineages known only from environmental DNA sequences, Soil Clone Group 1 is the most ubiquitous. These globally distributed fungi may dominate below-ground fungal communities, but their placement in the fungal tree of life has been uncertain. Here, we report cultures of this group and describe the class, Archaeorhizomycetes, phylogenetically placed within subphylum Taphrinomycotina in the Ascomycota. Archaeorhizomycetes comprises hundreds of cryptically reproducing filamentous species that do not form recognizable mycorrhizal structures and have saprotrophic potential, yet are omnipresent in roots and rhizosphere soil and show ecosystem and host root habitat specificity.
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MRBAYES: Bayesian inference of phylogenetic trees
John P. Huelsenbeck, Fredrik Ronquist · Bioinformatics · 2001 · 22.2K citations · Full text
Patrick D. Schloss, Sarah L. Westcott, Thomas Ryabin et al. · Applied and Environmental Microbiology · 2009 · 21.8K citations · Full text
PCR protocols — A guide to methods and applications
Trends in Genetics · 1990 · 11.9K citations
Environmental Genome Shotgun Sequencing of the Sargasso Sea
J. Craig Venter, Karin Remington, John F. Heidelberg et al. · Science · 2004 · 4.4K citations