Campylobacter fetus subspecies: Comparative genomics and prediction of potential virulence targets

References

Page 1

	Year	Citations
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Julie Thompson, Desmond G. Higgins, Toby J. Gibson Nucleic Acids Research	1994	64.4K
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods Koichiro Tamura, Daniel G. Peterson, Nora Peterson, Molecular Biology and Evolution Maximum Parsimony MethodsComparative GenomicsGeneticsGenomicsPhylogenetic Analysis	2011	40.1K
Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen Anders Krogh, B. Larsson, Gunnar von Heijne, Journal of Molecular Biology Functional GenomicsEngineeringStructural BioinformaticsBiomolecular Structure PredictionProtein Folding	2001	12.7K
Prodigal: prokaryotic gene recognition and translation initiation site identification Doug Hyatt, Gwo-Liang Chen, Philip LoCascio, BMC Bioinformatics	2010	12.2K
RNAmmer: consistent and rapid annotation of ribosomal RNA genes Karin Lagesen, Peter F. Hallin, Einar Andreas Rødland, Nucleic Acids Research EngineeringRibosomal RnaGeneticsGenomicsGene Recognition	2007	6.2K
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons Nabil-Fareed Alikhan, Nicola K. Petty, Nouri L. Ben Zakour, BMC Genomics	2011	3.3K
Genome analysis of multiple pathogenic isolates of <i>Streptococcus agalactiae</i> : Implications for the microbial “pan-genome” Hervé Tettelin, Vega Masignani, Michael J. Cieslewicz, Proceedings of the National Academy of Sciences	2005	2.6K
Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin Alexander Bolotin, Benoît Quinquis, Alexeï Sorokin, Microbiology	2005	1.7K
ACT: the Artemis comparison tool Tim Carver, Kim Rutherford, Matthew Berriman, Computer applications in the biosciences GeneticsGenomicsSequence AlignmentSemantic WebArtemis Distribution	2005	1.6K
A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action Kira S. Makarova, Nick V. Grishin, Svetlana A. Shabalina, Biology Direct	2006	1.2K

Page 1