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Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells

Florian Buettner, Kedar Nath Natarajan, Francesco Paolo Casale, Valentina Proserpio, Antonio Scialdone, Fabian J. Theis, Sarah A. Teichmann, John C. Marioni, Oliver Stegle

Nature Biotechnology · 2015 · 1.3K citations · 44 references

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44

Differential expression analysis for sequence count data

Simon Anders, Wolfgang Huber · Genome biology · 2010 · 16.4K citations · Full text

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The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

Cole Trapnell, Davide Cacchiarelli, Jonna Grimsby et al. · Nature Biotechnology · 2014 · 7.8K citations · Full text

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Genome-wide efficient mixed-model analysis for association studies

Xiang Zhou, Matthew Stephens · Nature Genetics · 2012 · 4K citations

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STRING 8--a global view on proteins and their functional interactions in 630 organisms

Lars Juhl Jensen, Michael Kuhn, Mitchell Stark et al. · Nucleic Acids Research · 2008 · 2.5K citations · Full text

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Posttranscriptional Control of T Cell Effector Function by Aerobic Glycolysis

Chih‐Hao Chang, Jonathan D. Curtis, Leonard B. Maggi et al. · Cell · 2013 · 2.2K citations · Full text

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