Concepedia

Refined DNase-seq protocol and data analysis reveals intrinsic bias in transcription factor footprint identification

Housheng Hansen He, Clifford A. Meyer, Shengen Shawn Hu, Mei-Wei Chen, Chongzhi Zang, Yin Liu, Prakash K. Rao, Han Xu, Henry W. Long, X. Shirley Liu,

Nature Methods · 2013 · 225 citations · 22 references

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22

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text

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An integrated encyclopedia of DNA elements in the human genome

Nature · 2012 · 19.4K citations · Full text

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Systematic Localization of Common Disease-Associated Variation in Regulatory DNA

Matthew T. Maurano, Richard Humbert, Eric Rynes et al. · Science · 2012 · 4K citations · Full text

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The accessible chromatin landscape of the human genome

Robert E. Thurman, Eric Rynes, Richard Humbert et al. · Nature · 2012 · 2.9K citations · Full text

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An integrated encyclopedia of DNA elements in the human genome

Ian Dunham, Anshul Kundaje, Shelley Force Aldred et al. · The Journal of the American Medical Association (JAMA) Network (American Medical Association) · 2012 · 2.8K citations · Full text

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