Concepedia

In silico study of Aquaporin V: Effects and affinity of the central pore-occluding lipid

Y.B. Zhang, Liao Y. Chen

Biophysical Chemistry · 2012 · 36 citations · 30 references

DOIFull text

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Concepts

References

30

VMD: Visual molecular dynamics

William Humphrey, Andrew Dalke, Klaus Schulten · Journal of Molecular Graphics · 1996 · 66.6K citations

, , +12

Comparison of simple potential functions for simulating liquid water

William L. Jorgensen, Jayaraman Chandrasekhar, Jeffry D. Madura et al. · The Journal of Chemical Physics · 1983 · 42.1K citations

, , +17

Particle mesh Ewald: An <i>N</i>⋅log(<i>N</i>) method for Ewald sums in large systems

Tom Darden, Darrin M. York, Lee G. Pedersen · The Journal of Chemical Physics · 1993 · 30.7K citations · Full text

, , +13

Scalable molecular dynamics with NAMD

J. C. Phillips, Rosemary Braun, Wei Wang et al. · Journal of Computational Chemistry · 2005 · 17.4K citations · Full text

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Development and current status of the CHARMM force field for nucleic acids

Alexander D. MacKerell, Nilesh K. Banavali, Nicolas Foloppe · Biopolymers · 2000 · 1.1K citations

, , +17