Marine and Freshwater Research · 2014 · 37 citations · 45 references
Life SciencesGeneticsZoologyMarine MammalogyPhylogeographyPopulation GeneticsComparative PhylogeographyMarine Genetic DiversityMarine PhylogeographyMarine Population GeneticsPhylogeography Of Marine SpeciesCircumglobal Distribution PatternsDemographic History InferenceMitochondrial Dna Sequence VariationPhylogeographic AnalysisPopulation Genetic StructurePopulation Genetic VariationPopulation StructuringShark Genetic Population Structure
Cosmopolitan pelagic species often show shallow genetic divergence and weak, or no, genetic structure across a species’ range. However, there have been few such genetic studies for pelagic sharks. The pelagic blue shark (Prionace glauca) has a broad circumglobal distribution in tropical and temperate oceans. To investigate the population genetic structure and demographic history of this species, we analysed variation in the mitochondrial cytochrome b sequence for a total of 404 specimens collected from 10 locations across the Indo-Pacific region. The observed genetic diversities were comparable among sampling locations (h = 0.77–0.87; p = 0.17–0.23%). Spatial analysis of molecular variance (SAMOVA), pairwise FST and conventional FST estimates, and analysis of isolation with migration indicated weak or no genetic differentiation of this species across the Indo-Pacific region. The results of three phylogeographic analyses (i.e. mismatch distribution and parsimony haplotype network analyses and a neutrality test) suggested that the Pacific blue shark had historically experienced a sudden population expansion. These results, coupled with the biological properties of this species, imply that historical climate fluctuation has had only a minor effect on the genetic structuring of the blue shark.
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Koichiro Tamura, Daniel G. Peterson, Nora Peterson et al. · Molecular Biology and Evolution · 2011 · 40.3K citations · Full text
A Simple Sequentially Rejective Multiple Test Procedure
Sture Holm · Scandinavian Journal of Statistics · 1979 · 21.8K citations
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
Pablo Librado, Julio Rozas · Bioinformatics · 2009 · 16.4K citations · Full text
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.
Fumio Tajima · Genetics · 1989 · 14.2K citations · Full text
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