Concepedia

Comparative genomic and phylogeographic analysis of Mycobacterium leprae

Marc Monot, Nadine Honoré, Thierry Garnier, Nora Zidane, Diana Sherafi, Alberto Paniz‐Mondolfi, Masanori Matsuoka, G. Michael Taylor, Helen D. Donoghue, Abi Bouwman,

Nature Genetics · 2009 · 394 citations · 55 references

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55

Basic local alignment search tool

Stephen F. Altschul, Warren Gish, Webb Miller et al. · Journal of Molecular Biology · 1990 · 94.5K citations

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text

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The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Naruya Saitou, M Nei · Molecular Biology and Evolution · 1987 · 60.5K citations · Full text

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis · Bioinformatics · 2006 · 15.9K citations · Full text

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APE: Analyses of Phylogenetics and Evolution in R language

Emmanuel Paradis, Julien Claude, Korbinian Strimmer · Bioinformatics · 2004 · 12.6K citations · Full text

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