Science · 2013 · 209 citations · 49 references
Life SciencesGeneticsMolecular GeneticsBehavioral GeneticsMolecular NeurobiologyNeurogeneticsAddictionAddiction NeurobiologyMolecular NeurogeneticsNeurotransmissionPsychiatric GeneticsDrug Response PhenotypesKnockout Mouse ModelsMutant Allele DisruptionNeurobiology Of Stimulant AddictionNonsynonymous MutationsReference Strain ComparisonsSubstance Use Disorder GeneticsSubstance Use Genetics
The inbred mouse C57BL/6J is the reference strain for genome sequence and for most behavioral and physiological phenotypes. However, the International Knockout Mouse Consortium uses an embryonic stem cell line derived from a related C57BL/6N substrain. We found that C57BL/6N has a lower acute and sensitized response to cocaine and methamphetamine. We mapped a single causative locus and identified a nonsynonymous mutation of serine to phenylalanine (S968F) in Cytoplasmic FMRP interacting protein 2 (Cyfip2) as the causative variant. The S968F mutation destabilizes CYFIP2, and deletion of the C57BL/6N mutant allele leads to acute and sensitized cocaine-response phenotypes. We propose that CYFIP2 is a key regulator of cocaine response in mammals and present a framework to use mouse substrains to identify previously unknown genes and alleles regulating behavior.
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The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
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Initial sequencing and comparative analysis of the mouse genome
Genome-wide atlas of gene expression in the adult mouse brain
Ed S. Lein, Michael Hawrylycz, Nancy Ao et al. · Nature · 2006 · 6K citations