Nucleic Acids Research · 2008 · 88 citations · 12 references
ComputingBiomedical InformaticsInformation SystemsDatabasesInformation RetrievalKnowledge RepresentationControlled VocabulariesOntology DesignOntology EngineeringQuery ManagementQuery ProcessingSemantic SearchBiomedical OntologiesBiomedical Ontology EngineeringDatabase Query InterfacesMedical OntologiesOntologiesService InteroperabilityService LookupUser Feedback
The Ontology Lookup Service (OLS) (http://www.ebi.ac.uk/ols) provides interactive and programmatic interfaces to query, browse and navigate an ever increasing number of biomedical ontologies and controlled vocabularies. The volume of data available for querying has more than quadrupled since it went into production and OLS functionality has been integrated into several high-usage databases and data entry tools. Improvements have been made to both OLS query interfaces, based on user feedback and requirements, to improve usability and service interoperability and provide novel ways to perform queries.
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ChEBI: a database and ontology for chemical entities of biological interest
Kirill Degtyarenko, Paula de Matos, Marcus Ennis et al. · Nucleic Acids Research · 2007 · 1.1K citations · Full text
Taverna: a tool for building and running workflows of services
Duncan Hull, Katherine Wolstencroft, Richard Stevens et al. · Nucleic Acids Research · 2006 · 952 citations · Full text
IntAct--open source resource for molecular interaction data
Samuel Kerrien, Yasmin Alam-Faruque, Bruno Aranda et al. · Nucleic Acids Research · 2006 · 806 citations · Full text