Nucleic Acids Research · 1997 · 141 citations · 11 references
Life SciencesBioinformaticsMolecular BiologyGene ExpressionTranscriptionTranscriptional RegulationCis-regulatory ElementsGene Regulatory ElementsGenomic DatabasesRegulatory GenomicsTranscription FactorsTranscriptional Regulation In EukaryotesComposite Regulatory ElementsDna Binding SitesFunctional Genomics DatabasesGenome Annotation DatabasesRegulatory Element AnnotationTranscript DatabasesTranscription Factor Binding Site AnnotationTranscription Factor Binding Sites
Three databases that provide data on transcriptional regulation are described. TRANSFAC is a database on transcription factors and their DNA binding sites. TRRD (Transcription Regulatory Region Database) collects information about complete regulatory regions, their regulation properties and architecture. COMPEL comprises specific information on composite regulatory elements. Here, we describe the present status of these databases and the first steps towards their federation.
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Hannah C Lewis, Wiweka Kaszubska, John F. DeLamarter et al. · Molecular and Cellular Biology · 1994 · 158 citations · Full text