Genetics and Molecular Research · 2013 · 19 citations · 25 references
Life SciencesPlant BiologyPlant SciencesPlant GeneticsPlant GenomicsPlant Molecular BiologyFlower DevelopmentPlant Gene ExpressionPlant Hormone SignalingPlant HormonesPlant Transcriptional RegulationSignal Transduction In PlantsAutonomous Flowering PathwayFloral InductionFloweringFlowering RegulationGibberellin-mediated FloweringHormone Response NetworksPhotoperiodic Control Of FloweringPhotoperiodic Regulation Of Flowering
Molecular analysis of floral induction in Arabidopsis has identified several flowering time genes related to 4 response networks defined by the autonomous, gibberellin, photoperiod, and vernalization pathways. Although grass flowering processes include ancestral functions shared by both mono- and dicots, they have developed their own mechanisms to transmit floral induction signals. Despite its high production capacity and its important role in biofuel production, almost no information is available about the flowering process in sugarcane. We searched the Sugarcane Expressed Sequence Tags database to look for elements of the flowering signaling pathway under photoperiodic control. Sequences showing significant similarity to flowering time genes of other species were clustered, annotated, and analyzed for conserved domains. Multiple alignments comparing the sequences found in the sugarcane database and those from other species were performed and their phylogenetic relationship assessed using the MEGA 4.0 software. Electronic Northerns were run with Cluster and TreeView programs, allowing us to identify putative members of the photoperiod-controlled flowering pathway of sugarcane.
25
Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0
Koichiro Tamura, Joel T. Dudley, M Nei et al. · Molecular Biology and Evolution · 2007 · 28.8K citations · Full text
CAP3: A DNA Sequence Assembly Program
Xiaoqiu Huang, Anup Madan · Genome Research · 1999 · 5.3K citations · Full text