Science · 2010 · 1.1K citations · 25 references
Life SciencesInfectious DiseasesMicrobiologyGenomicsMedical MicrobiologyMicrobial GeneticsAntibiotic ResistanceBacterial EpidemiologyBacterial InfectionsEvolutionary EpidemiologyGenomic EpidemiologyMicrobial Transmission DynamicsDirect Person-to-person TransmissionGenomic Contact TracingInfection Transmission DynamicsPathogen PhylogeneticsPathogen Source Tracing
Current methods for differentiating isolates of predominant lineages of pathogenic bacteria often do not provide sufficient resolution to define precise relationships. Here, we describe a high-throughput genomics approach that provides a high-resolution view of the epidemiology and microevolution of a dominant strain of methicillin-resistant Staphylococcus aureus (MRSA). This approach reveals the global geographic structure within the lineage, its intercontinental transmission through four decades, and the potential to trace person-to-person transmission within a hospital environment. The ability to interrogate and resolve bacterial populations is applicable to a range of infectious diseases, as well as microbial ecology.
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Dag Harmsen, Heike Claus, Wolfgang Witte et al. · Journal of Clinical Microbiology · 2003 · 1.6K citations · Full text