Proceedings of the National Academy of Sciences · 2007 · 71 citations · 32 references
Life SciencesGeneticsMolecular GeneticsAutoimmunityHuman GeneticsImmunogeneticsAutoimmune Disease Susceptibility GenesAutoimmune DiseasesDisease Susceptibility LociGenetic SusceptibilityGenetic Susceptibility To AutoimmunitySystemic Lupus ErythematosusComplement System GenesDisease-specific Susceptibility LociNonparametric Linkage AnalysisPositional Candidate Gene AnalysisPositional Candidate Gene MappingSingle-nucleotide Polymorphism AnalysisSingle-nucleotide Polymorphism VariationSystemic Lupus Erythematosus Associations
A genomic region on distal mouse chromosome 1 and its syntenic human counterpart 1q23-42 show strong evidence of harboring lupus susceptibility genes. We found evidence of linkage at 1q32.2 in a targeted genome scan of 1q21-43 in 126 lupus multiplex families containing 151 affected sibpairs (nonparametric linkage score 2.52, P = 0.006). A positional candidate gene at 1q32.2, complement receptor 2 (CR2), is also a candidate in the murine Sle1c lupus susceptibility locus. To explore its role in human disease, we analyzed 1,416 individuals from 258 Caucasian and 142 Chinese lupus simplex families and demonstrated that a common three-single-nucleotide polymorphism CR2 haplotype (rs3813946, rs1048971, rs17615) was associated with lupus susceptibility (P = 0.00001) with a 1.54-fold increased risk for the development of disease. Single-nucleotide polymorphism 1 (rs3813946), located in the 5' untranslated region of the CR2 gene, altered transcriptional activity, suggesting a potential mechanism by which CR2 could contribute to the development of lupus. Our findings reveal that CR2 is a likely susceptibility gene for human lupus at 1q32.2, extending previous studies suggesting that CR2 participates in the pathogenesis of systemic lupus erythematosus.
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Parametric and nonparametric linkage analysis: a unified multipoint approach.
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Life Sciences, Genetics, Immunology +11