Journal of Biological Chemistry · 2007 · 39 citations · 55 references
Life SciencesBiochemistryMolecular BiologyGlycobiologyImmunopathologyProteomicsAntibody StructureCartilage BiologyExtracellular Matrix GlycansGlycan AnalysisGlycan StructurePolysaccharide StructureDisaccharide AnalysisMicroarray ImmunoassayMonoclonal Antibody RecognitionOligosaccharide ProcessingOligosaccharide ProfilingOligosaccharide RecognitionProteoglycan BiologySulfation Patterns
Chondroitin sulfate (CS) proteoglycans are major components of cartilage and other connective tissues. The monoclonal antibody WF6, developed against embryonic shark cartilage CS, recognizes an epitope in CS chains, which is expressed in ovarian cancer and variably in joint diseases. To elucidate the structure of the epitope, we isolated oligosaccharide fractions from a partial chondroitinase ABC digest of shark cartilage CS-C and established their chain length, disaccharide composition, sulfate content, and sulfation pattern. These structurally defined oligosaccharide fractions were characterized for binding to WF6 by enzyme-linked immunosorbent assay using an oligosaccharide microarray prepared with CS oligosaccharides derivatized with a fluorescent aminolipid. The lowest molecular weight fraction recognized by WF6 contained octasaccharides, which were split into five subfractions. The most reactive subfraction contained several distinct octasaccharide sequences. Two octasaccharides, ΔD-C-C-C and ΔC-C-A-D (where A represents GlcUAβ1-3GalNAc(4-O-sulfate), C is GlcUAβ1-3Gal-NAc(6-O-sulfate), D is GlcUA(2-O-sulfate)β1-3GalNAc(6-O-sulfate), ΔCis Δ4,5HexUAα1-3GalNAc(6-O-sulfate), and ΔDis Δ4,5HexUA(2-O-sulfate)α1-3GalNAc(6-O-sulfate)), were recognized by WF6, but other related octasaccharides, ΔC-A-D-C and ΔC-C-C-C, were not. The structure and sequences of both the binding and nonbinding octasaccharides were compared by computer modeling, which revealed a remarkable similarity between the shape and distribution of the electrostatic potential in the two different octasaccharide sequences that bound to WF6 and that differed from the nonbinding octasaccharides. The strong similarity in structure predicted for the two binding CS octasaccharides (ΔD-C-C-C and ΔC-C-A-D) provided a possible explanation for their similar affinity for WF6, although they differed in sequence and thus form two specific mimetopes for the antibody. Chondroitin sulfate (CS) proteoglycans are major components of cartilage and other connective tissues. The monoclonal antibody WF6, developed against embryonic shark cartilage CS, recognizes an epitope in CS chains, which is expressed in ovarian cancer and variably in joint diseases. To elucidate the structure of the epitope, we isolated oligosaccharide fractions from a partial chondroitinase ABC digest of shark cartilage CS-C and established their chain length, disaccharide composition, sulfate content, and sulfation pattern. These structurally defined oligosaccharide fractions were characterized for binding to WF6 by enzyme-linked immunosorbent assay using an oligosaccharide microarray prepared with CS oligosaccharides derivatized with a fluorescent aminolipid. The lowest molecular weight fraction recognized by WF6 contained octasaccharides, which were split into five subfractions. The most reactive subfraction contained several distinct octasaccharide sequences. Two octasaccharides, ΔD-C-C-C and ΔC-C-A-D (where A represents GlcUAβ1-3GalNAc(4-O-sulfate), C is GlcUAβ1-3Gal-NAc(6-O-sulfate), D is GlcUA(2-O-sulfate)β1-3GalNAc(6-O-sulfate), ΔCis Δ4,5HexUAα1-3GalNAc(6-O-sulfate), and ΔDis Δ4,5HexUA(2-O-sulfate)α1-3GalNAc(6-O-sulfate)), were recognized by WF6, but other related octasaccharides, ΔC-A-D-C and ΔC-C-C-C, were not. The structure and sequences of both the binding and nonbinding octasaccharides were compared by computer modeling, which revealed a remarkable similarity between the shape and distribution of the electrostatic potential in the two different octasaccharide sequences that bound to WF6 and that differed from the nonbinding octasaccharides. The strong similarity in structure predicted for the two binding CS octasaccharides (ΔD-C-C-C and ΔC-C-A-D) provided a possible explanation for their similar affinity for WF6, although they differed in sequence and thus form two specific mimetopes for the antibody. Chondroitin sulfate proteoglycans (CS-PGs) 5The abbreviations used are: CS, chondroitin sulfate; PG, proteoglycan; GAG, glycosaminoglycan; GlcUA, d-glucuronic acid; HexUA, hexuronic acid; IdoUA, l-iduronic acid; 2S, 2-O-sulfate; 4S, 4-O-sulfate; 6S, 6-O-sulfate; ELISA, enzyme-linked immunosorbent assay; BSA, bovine serum albumin; HPLC, high performance liquid chromatography; FPLC, fast protein liquid chromatography; SAX, strong anion exchange resin; MALDI-TOF, matrix-assisted laser desorption ionization-time-of-flight; MS, mass spectrometry; 2AB, 2-aminobenzamide; ADHP, N-aminoacetyl-N-(9-anthracenylmethyl)-1,2-dihexadecyl-sn-glycero-3-phosphoethanolamine. are expressed on the surface of most cells and in extracellular matrices in vertebrates, where CS is linked to a wide range of core protein families. They are increasingly implicated as important regulators of many biological processes, contributing in various ways to the physical strength of tissues, cell adhesion, and signal transduction (1Letourneau P.C. Condic M.L. Snow D.M. Curr. Opin. Genet. Dev. 1992; 2: 625-634Crossref PubMed Scopus (54) Google Scholar, 2Reichardt L.F. Tomaselli K.J. Annu. Rev. Neurosci. 1991; 14: 531-570Crossref PubMed Scopus (657) Google Scholar, 3Hardingham 1992; PubMed Scopus Google Scholar, Curr. Opin. PubMed Scopus Google CS a the biological of which are The structure is an linked a to a in a and is of which by various where and d-glucuronic and CS is expressed in and by of and chain length, which for of the and of to which they are The sulfation of CS with in cartilage Google and which specific disaccharide the of and Curr. Opin. PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, Neurosci. PubMed Scopus Google CS sequences are in binding PubMed Scopus Google is related to in chain and PubMed Scopus Google that specific of CS PubMed Scopus Google but of the characterized in PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, PubMed Scopus Google with revealed of in various and and in PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, PubMed Google The of that on CS is used in many of as and PubMed Scopus Google and in the of PubMed Scopus Google Scholar, 14: PubMed Scopus Google Scholar, PubMed Scopus Google of cartilage revealed that in were in the CS cartilage PubMed Scopus Google in the sulfation of CS were in the in joint PubMed Scopus Google CS in cartilage in of with 1991; PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, Google potential for the and of the WF6 is a with using embryonic shark cartilage as is reactive with shark and the epitope in CS and from shark but the antibody is with other and enzyme-linked immunosorbent assay that an of WF6 epitope in serum from of and 14: PubMed Scopus Google and in of ovarian cancer PubMed Scopus Google The established of the antibody and distribution CS that the epitope is a specific sequence in but CS and is of A C and D thus important to structure and to sequences specific biological as in the of recognized by other and PubMed Scopus Google as as sulfate PubMed Scopus Google the structure of CS on from various tissues, but to sulfation sequences using to CS PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, PubMed Scopus Google The recognized by are sequences in CS PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, Dev. PubMed Scopus Google with in the chains, which are by with chondroitinase ABC PubMed Scopus Google The WF6, which recognizes a epitope on CS and in in These provided that the of the WF6 epitope is and that the of sequences is a of of the epitope is thus to the biological of specific chain sequences and the that their To the of the CS that are recognized by the WF6, we isolated and characterized a range of oligosaccharide from CS-C of shark cartilage and defined two octasaccharide sequences that are recognized by the octasaccharides were by computer and to their the of molecular PubMed Scopus Google The most and the of the CS octasaccharides recognized by and were similar with and were in with the structure by the of the used a is for are a is in of the octasaccharides recognized by WF6 were a which The and by in were used as the in the molecular to the we the and by the and the in the octasaccharide sequences. of the and of the and octasaccharides the and predicted the molecular from shark cartilage and chondroitinase ABC from were from from from were from The WF6, which using embryonic shark cartilage as in and is an with chain and is reactive with the in the from shark cartilage and with the antibody against from cartilage and fractions were prepared and as PubMed Google and of CS CS-C from shark cartilage by with chondroitinase of CS-C with of the in of The digest on a of and on a of in a The lowest molecular weight fraction which with the binding of WF6, on a of strong anion exchange with The of fraction CS-C and a used for the using a of from to a of fractions were The were on a of and of the molecular mass of the oligosaccharide in subfraction by matrix-assisted laser desorption mass and by the for using as a PubMed Scopus Google of oligosaccharide fractions were in a in a used as the a of in A used as a to the of the oligosaccharides PubMed Scopus Google of with of oligosaccharide fraction and with of the The on the a of and used for the of the of with of oligosaccharides with a as by PubMed Scopus Google of a oligosaccharide in a of a 2AB, in to the oligosaccharide and the for The derivatized oligosaccharide by using in a of and of oligosaccharides were by anion exchange on an with a of a of as for the of CS and PubMed Scopus Google were using an with and of and oligosaccharides with were by for of CS-C octasaccharide fraction derivatized with The by and an of the octasaccharide fraction with chondroitinase ABC and by anion exchange on an to the disaccharide to from the digest with chondroitinase ABC of digest with by and by anion exchange to the disaccharide to from the and the of the octasaccharide for shark on a in in The were with and with bovine serum in the for were with a of WF6 with a fraction of shark cartilage a in for WF6 with different for various and to the fraction in the of The were with the and for with specific with in the the were developed with The in an by were in The as of with oligosaccharides were to from and an as PubMed Scopus Google a oligosaccharide fraction as with of in The in a for in of and for the for The in a and in and by in a of for oligosaccharide microarray CS of CS-C oligosaccharide as PubMed Scopus Google with CS-C oligosaccharides derivatized with the fluorescent were in and a as by using a a of with in for and with WF6 in in for The were several with in and for with with with in The binding of the antibody using to the of with a assay using the PubMed Scopus Google with as a on an of PubMed Google of the of CS the of a CS disaccharide The of the were for the five disaccharide in the GlcUAβ1-3GalNAc(4-O-sulfate), GlcUA(2-O-sulfate)β1-3GalNAc(6-O-sulfate), and The PubMed Scopus Google that CS disaccharide with similar and and and and and and in PubMed Scopus Google to the and of the of the the in disaccharide in the range of and were and were using the molecular with the on the the into the of the disaccharide of the other CS octasaccharides were and and molecular were to the biological of the isolated oligosaccharides ΔC-C-C-C, and were using the on the and their were by the of a where the from an to a and to the using the 1992; Scopus Google Scholar, Scopus Google The were with the from to and the of using the 1992; Scopus Google Scholar, Scopus Google The from the were used as the structure in molecular were to a in the of the and the using the 2: Scopus Google Scholar, Rev. Scopus Google with the of were to a in the of using the Scopus Google Scholar, Scopus Google Scholar, Scopus Google Scholar, Scopus Google Scholar, 14: Scopus Google Scholar, Scopus Google Scholar, Scopus Google Scholar, Scopus (54) Google Scholar, 1992; Scopus Google The structure of the ΔD-C-C-C octasaccharide used as a for of the molecular The the of the between the of The distribution on the Scopus Google using the molecular and with the The WF6 in the CS of from of by with from shark cartilage as of CS-C C disaccharide and characterized by D and in A in sulfate in PubMed Scopus Google and sulfate as the shark cartilage fraction with the core protein from the that WF6 with CS from different and that the for a of CS The to with in D disaccharide of CS-C and the of the of the CS with the partial digest of a CS-C with chondroitinase ABC by on a of into which were using to of for of the binding of WF6 to from shark cartilage and of the fractions with fraction the of the with chain on 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for ΔC-C-A-D for ΔC-C-A-D These the the of the octasaccharides, ΔD-C-C-C and by the used to the distribution for the isolated octasaccharide sequences to in their molecular shape and of the and CS octasaccharides. ΔD-C-C-C and ΔC-C-A-D ΔD-C-C-C and ΔC-A-D-C ΔD-C-C-C and ΔC-C-A-D and ΔC-A-D-C ΔC-C-A-D and were and as of the of the which the by the on the for the isolated octasaccharide sequences Scopus Google and is in The distribution the for both the sulfate and the the of the and with the the distribution revealed that the of the octasaccharides (ΔD-C-C-C and ΔC-C-A-D) similar A and but the a distinct shape which is recognized by WF6, a similarity to ΔC-A-D-C in of the the of ΔD-C-C-C and ΔC-C-A-D were different from that of ΔC-A-D-C both of octasaccharides were similar is that the of the of ΔD-C-C-C and ΔC-C-A-D are the of the octasaccharides in to of ΔC-A-D-C and the of the distribution the that were to the octasaccharides and from the octasaccharides. and of the and Scopus Google of the is the most to with an and used for the of the octasaccharides were for the of the in octasaccharide as in and for the in the molecular by the were from both the and the which the in a of of sulfate and which in the distribution are in and The sulfate of both the of ΔD-C-C-C and the of in the of the of the for the of the and for the and of the D were and the a compared with of the of ΔD-C-C-C and The of the sulfate for were to and which the of the and to the by the the of the sulfate on both of the octasaccharides in the by of the of the isolated CS are from the to the The are from the to the in a on of the sulfate of the isolated CS in a of the of the isolated CS are from the to the The are from the to the in a The of the in and that of the D in ΔC-C-A-D of and strong of the of the octasaccharides, ΔC-A-D-C and ΔC-C-C-C, a revealed on the in the of the octasaccharides but on of the octasaccharides. These the of the of the of and that of the D of ΔC-C-A-D for the by the in to the sulfate on both of the octasaccharides. CS are in composition, the sulfate and sulfation as revealed by of a of oligosaccharides isolated from shark cartilage CS-C PubMed Scopus Google is to the specific CS structure for the by we and characterized CS octasaccharide sequences. the and ΔC-A-D-C PubMed Scopus Google as as their and PubMed Scopus Google isolated from shark cartilage and with chondroitinase ABC ΔD-C-C-C ΔC-C-A-D their and isolated PubMed Scopus Google two octasaccharide sequences (ΔD-C-C-C and ΔC-C-A-D) were recognized by the WF6 and as the CS for with as and sulfate which were by to with sequences from shark cartilage shark cartilage cartilage sulfate PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, PubMed Scopus Google Scholar, PubMed Scopus Google that a chain antibody with sequences isolated from cartilage PubMed Scopus Google the octasaccharides and the and which were recognized by WF6, were isolated in and PubMed Scopus Google from shark cartilage CS chains, the are in of the by WF6 in from with 14: PubMed Scopus Google and ovarian PubMed Scopus Google of the that the WF6, with oligosaccharides similar distinct we used molecular to possible by the octasaccharides and from the octasaccharides. The of the and sequences of both the two and two CS octasaccharides by computer revealed similarity in the the but similarity in the of the to their similarity in the binding to the WF6, using the oligosaccharide where ΔD-C-C-C and ΔC-C-A-D binding to WF6, but and ΔC-A-D-C and were against the binding of WF6 to is a for the octasaccharide for The in of the two octasaccharides is and is an which is in the CS the in octasaccharide is recognized by WF6, as by the of the on A and the in ΔD-C-C-C and that in ΔC-C-A-D were with an and thus to an the on the of the of and the on the of the D of ΔC-C-A-D were recognized by WF6 A and that the sulfate on the and with are in the by the and the octasaccharide as to the sulfate The of ΔD-C-C-C and which were recognized by WF6, were similar that the of the by WF6 on the shape of the octasaccharides. The from the between the were different in the and octasaccharides that the of the sulfate and the of the the sequences of the oligosaccharides the distribution and the the octasaccharides (ΔD-C-C-C and ΔC-C-A-D) a D and a in the they similar distribution of the The on the shape of the of ΔD-C-C-C and that the WF6 binding a on both and a in the that ΔC-A-D-C similarity to the two octasaccharides and recognized by WF6, but the binding PubMed Scopus Google Scholar, PubMed Scopus Google on the of and using several structurally defined octasaccharide sequences revealed the of a but the electrostatic by different octasaccharide sequences by PubMed Scopus Google The on sequences PubMed Scopus Google were using and of molecular in the The in the were in with the in the for that is for the to in the and electrostatic potential that the are in the D and the of to in the of the sequences into the we the for the of the isolated octasaccharides by molecular the and the distribution on the The molecular which is the and electrostatic potential revealed electrostatic that the octasaccharides a similar which is by the and the of the of the sulfate and the on we for the WF6 binding in the and both of octasaccharide sequence to and the for the and PubMed Scopus Google that the an important by the of the of the and the sulfate with the in the that the octasaccharides the of both the sulfate and the recognized by the the of the on the the on the and the on the are in the of the of the the and and the on the D are the for the the of the and of the on to the in the molecular of oligosaccharides by monoclonal in the a of the various and electrostatic of CS oligosaccharides compared with to the by the of using and molecular and a of the electrostatic and of which their in for the of and for of fraction with
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A modified uronic acid carbazole reaction
Thomas Bitter, H. M. Muir · Analytical Biochemistry · 1962 · 6.3K citations