Fluctuation analysis of motor protein movement and single enzyme kinetics.

Karel Svoboda, Partha P. Mitra, Stephan Block

Proceedings of the National Academy of Sciences · 1994 · 296 citations · 22 references

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TL;DR

Fluctuation analysis is a powerful tool for studying kinetic behavior when the output of a single enzyme can be monitored. We measured fluctuations in the displacement of silica beads driven by single kinesin molecules under low load and saturating ATP. The observed variance in bead position was far smaller than expected for stepwise lattice movement, indicating that two or more sequential processes with comparable rates dominate the kinesin cycle and ruling out certain thermal ratchet and multi‑step ATP hydrolysis models.

Abstract

We studied fluctuations in the displacement of silica beads driven by single molecules of the motor protein kinesin, moving under low mechanical loads at saturating ATP concentrations. The variance in position was significantly smaller than expected for the case of stepwise movement along a regular lattice of positions with exponentially distributed intervals. The small variance suggests that two or more sequential processes with comparable reaction rates dominate the biochemical cycle. The low value is inconsistent with certain recently proposed thermal ratchet models for motor movement as well as with scenarios where the hydrolysis of a single ATP molecule leads to a cluster of several steps. Fluctuation analysis is a potential powerful tool for studying kinetic behavior whenever the output of a single enzyme can be monitored.

References

22