Molecular Cell · 2012 · 198 citations · 33 references
MedicineMolecular BiologyMolecular GeneticsGene ExpressionTranscriptionTranscriptional RegulationCis-regulatory ElementsGene Regulatory ElementsNucleic Acid-protein InteractionsPromoter ArchitecturePromoter RecognitionTranscription FactorsDirect RecruitmentLong-range Regulatory InteractionsPositive Predictive ValuePositive Predictive Value EstimationPromoter Activity AnalysisPromoter Distal InteractionsPromoter-promoter InteractionsTranscription Factor Recruitment
33
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text
Mediator and cohesin connect gene expression and chromatin architecture
Michael H. Kagey, Jamie J. Newman, Steve Bilodeau et al. · Nature · 2010 · 1.9K citations · Full text