Proceedings of the National Academy of Sciences · 2010 · 74 citations · 17 references
Natural SciencesBiochemistryBiophysicsBiomolecular ModelingMolecular BiophysicsSpectroscopyFluorescence SpectroscopyOptical SpectroscopyPhotochemistryPhotosynthesis In MicroorganismsPhotosynthetic Energy TransferPhotosynthetic PigmentsAbsorption SpectraChromophore PhotochemistryChromophore PhotophysicsChromophore StructureMolecular ChromophoresQuantum Chemistry SimulationRetinal Chromophore IsomerizationUnidirectional Molecular Rotation
The implementation of multiconfigurational quantum chemistry methods into a quantum-mechanics/molecular-mechanics protocol has allowed the construction of a realistic computer model for the sensory rhodopsin of the cyanobacterium Anabaena PCC 7120. The model, which reproduces the absorption spectra of both the all-trans and 13-cis forms of the protein and their associated K and L intermediates, is employed to investigate the light-driven steps of the photochromic cycle exhibited by the protein. It is found that the photoisomerizations of the all-trans and 13-cis retinal chromophores occur through unidirectional, counterclockwise 180° rotations of the =C14-C15= moiety with respect to the Lys210-linked end of the chromophore axis. Thus, the sequential interconversions of the all-trans and 13-cis forms during a single photochromic cycle yield a complete (360°) unidirectional rotation of the =C14-C15= moiety. This finding implies that Anabaena sensory rhodopsin is a biological realization of a light-driven molecular rotor.
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