Proceedings of the National Academy of Sciences · 2013 · 67 citations · 39 references
Life SciencesBiochemistryMolecular BiologyMicrobial PhysiologyPhotosynthesisRedox BiochemistryAnaerobic MetabolismCellular Responses To HypoxiaHemoglobin PhysiologyHypoxia AdaptationHypoxia PhysiologyReactive Oxygen SpeciesAdaptation To AnoxiaAnaerobic Growth PhysiologyHemoglobin FunctionHemoglobin Gene RegulationHypoxic Cell Survival MechanismsHypoxic MicroenvironmentOxygen Effects On GrowthRedox Signaling In Hypoxia
Hemoglobins are recognized today as a diverse family of proteins present in all kingdoms of life and performing multiple reactions beyond O2 chemistry. The physiological roles of most hemoglobins remain elusive. Here, we show that a 2-on-2 ("truncated") hemoglobin, termed THB8, is required for hypoxic growth and the expression of anaerobic genes in Chlamydomonas reinhardtii. THB8 is 1 of 12 2-on-2 hemoglobins in this species. It belongs to a subclass within the 2-on-2 hemoglobin class I family whose members feature a remarkable variety of domain arrangements and lengths. Posttranscriptional silencing of the THB8 gene results in the mis-regulation of several genes and a growth defect under hypoxic conditions. The latter is intensified in the presence of an NO scavenger, which also impairs growth of wild-type cells. As recombinant THB8 furthermore reacts with NO, the results of this study indicate that THB8 is part of an NO-dependent signaling pathway.
39
Koichiro Tamura, Daniel G. Peterson, Nora Peterson et al. · Molecular Biology and Evolution · 2011 · 40.3K citations · Full text
Differential expression analysis for sequence count data
Simon Anders, Wolfgang Huber · Genome biology · 2010 · 16.4K citations · Full text