Current Protocols in Bioinformatics · 2010 · 260 citations · 24 references
Life SciencesBioinformaticsMolecular BiologyComparative GenomicsGenomicsRna BiologyGenomic AnnotationGenomic DatabasesMicrorna BiogenesisMicrorna BiologySequence Similarity SearchGenome Annotation DatabasesMicrorna AnnotationMicrorna FamiliesMicrorna GenesSearchesSequence Retrieval SystemsTranscript Databases
miRBase is the central repository for microRNA (miRNA) sequence information. miRBase has a role in defining the nomenclature for miRNA genes and assigning names to novel miRNAs for publication in peer-reviewed journals. The online miRBase database is a resource containing all published miRNA sequences, together with textual annotation and links to the primary literature and to other secondary databases. The database provides a variety of methods to query the data, by specific searches of sequences and associated text and literature. All miRBase data are also available for download from the miRBase FTP site.
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Basic local alignment search tool
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