Enterome (France)

A unified catalog of 204,938 reference genomes from the human gut microbiome

Alexandre Almeida, Stephen Nayfach, Miguel Boland et al. · Nature Biotechnology · 2020 · 1.4K citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data

Florian Plaza Oñate, Emmanuelle Le Chatelier, Mathieu Almeida et al. · Bioinformatics · 2018 · 145 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Fecal Microbiota Analysis: An Overview of Sample Collection Methods and Sequencing Strategies

Vincent Thomas, James R. Clark, Joël Doré · Future Microbiology · 2015 · 122 citations

Life Sciences, Microbiology, Gastroenterology +16

Gut Microbial Diversity Is Reduced in Smokers with Crohnʼs Disease

Jorrit L. Opstelten, Jonathan Plassais, Saskia W. C. van Mil et al. · Inflammatory Bowel Diseases · 2016 · 106 citations · Full text

Life Sciences, Microbiology, Genomics +16

Increased incidence of systemic serious viral infections in patients with inflammatory bowel disease associates with active disease and use of thiopurines

Andrew Wisniewski, Julien Kirchgesner, Philippe Seksik et al. · United European Gastroenterology Journal · 2019 · 94 citations · Full text

Medicine, Infectious Diseases, Internal Medicine +15