Concepedia

Variant Effect Prediction

Variant Effect Prediction is a computational method that belongs to the class of genomic analysis techniques and specifically identifies the functional consequences of genetic variants by predicting their impact on protein structure, function, or regulation based on sequence and evolutionary features.

204

Publications

69.2K

Citations

1.5K

Authors

512

Institutions

Publications per year

2017–2026

135

Parents

Publications

204

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

Pablo Cingolani, Adrian E. Platts, Le Lily Wang et al. · Fly · 2012 · 12.7K citations · Full text

, , +17

The Ensembl Variant Effect Predictor

William McLaren, Laurent Gil, Sarah Hunt et al. · Genome biology · 2016 · 8.7K citations · Full text

, , +17

Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm

P. Naresh Kumar, Steven Henikoff, Pauline C. Ng · Nature Protocols · 2009 · 6.7K citations

, , +15

Predicting Functional Effect of Human Missense Mutations Using PolyPhen‐2

Ivan Adzhubei, Daniel M. Jordan, Shamil Sunyaev · Current Protocols in Human Genetics · 2013 · 3.8K citations

, , +17

PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels

Yongwook Choi, Agnes P. Chan · Bioinformatics · 2015 · 2.7K citations · Full text

, , +14

1–5 of 204

Authors

1.5K

  1. SH
    Sarah Hunt

    Wellcome Sanger Institute, United Kingdom

    12 publications · 16.9K citations

    11

    h-index

  2. PF
    Paul Flicek

    European Bioinformatics Institute, United Kingdom

    10 publications · 17.2K citations

    10

    h-index

  3. FC
    Fiona Cunningham

    European Bioinformatics Institute, United Kingdom

    10 publications · 17.9K citations

    10

    h-index

  4. YB
    Yana Bromberg

    Rutgers, The State University of New Jersey, United States

    9 publications · 2K citations

    9

    h-index

  5. SJ
    Stephen J. Trevanion

    European Bioinformatics Institute, United Kingdom

    8 publications · 7.6K citations

    8

    h-index

1–5 of 1.5K

Institutions

512

  1. European Bioinformatics Institute

    Cambridge, United Kingdom

    18 h-index

    583 publications

    703.7K citations

  2. Technical University of Munich

    Munich, Germany

    9 h-index

    30 publications

    3.6K citations

  3. University of Washington

    Seattle, United States

    8 h-index

    24 publications

    4.4K citations

  4. Institute of Genetics and Cancer

    Edinburgh, United Kingdom

    8 h-index

    21 publications

    1.9K citations

  5. University of Cambridge

    Cambridge, United Kingdom

    8 h-index

    22 publications

    23.1K citations

  6. University of Edinburgh

    Edinburgh, United Kingdom

    8 h-index

    23 publications

    2.3K citations

  7. Lund University

    Lund, Sweden

    8 h-index

    19 publications

    1.5K citations

  8. University of Toronto

    Toronto, Canada

    7 h-index

    24 publications

    1K citations

1–8 of 512

Venues

  1. Nucleic Acids Research

    25 publications · 10.9K citations

    21

    h-index

  2. Human Mutation

    20 publications · 1.3K citations

    17

    h-index

  3. Bioinformatics

    17 publications · 8.3K citations

    16

    h-index

  4. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 21 publications · 1.6K citations

    15

    h-index

  5. Nature Communications

    7 publications · 544 citations

    7

    h-index

1–5