Concepedia

Unsupervised Cell Type Annotation

Unsupervised Cell Type Annotation is a computational methodology in single-cell genomics that assigns cell type labels to unlabeled biological cells based on intrinsic patterns and structures discovered directly from high-dimensional transcriptomic data without relying on prior knowledge or reference datasets.

16

Publications

1.9K

Citations

103

Authors

51

Institutions

Publications per year

2017–2026

14

Parents

Publications

16

scBERT as a large-scale pretrained deep language model for cell type annotation of single-cell RNA-seq data

Fan Yang, Wenchuan Wang, Fang Wang et al. · Nature Machine Intelligence · 2022 · 588 citations

, , +15

Single-Cell Transcriptomics of the Human Endocrine Pancreas

Yue J. Wang, Jonathan Schug, Kyoung‐Jae Won et al. · Diabetes · 2016 · 480 citations · Full text

, , +15

ACTINN: automated identification of cell types in single cell RNA sequencing

Feiyang Ma, Matteo Pellegrini · Bioinformatics · 2019 · 273 citations · Full text

, , +17

Strategies for Accurate Cell Type Identification in CODEX Multiplexed Imaging Data

John W. Hickey, Yuqi Tan, Garry P. Nolan et al. · Frontiers in Immunology · 2021 · 158 citations · Full text

, , +12

A web server for comparative analysis of single-cell RNA-seq data

Amir Alavi, Matthew Ruffalo, Aiyappa Parvangada et al. · Nature Communications · 2018 · 62 citations · Full text

, , +15

1–5 of 16

Authors

103

  1. OL
    Oscar L. Rodriguez

    University of Louisville, United States

    2 publications · 73 citations

    2

    h-index

  2. MM
    Michael M. Hoffman

    University of Toronto, Canada

    2 publications · 73 citations

    2

    h-index

  3. FW
    Fang Wang

    Tencent (China), China

    2 publications · 612 citations

    2

    h-index

  4. WS
    William Stafford Noble

    University of Washington, United States

    2 publications · 73 citations

    2

    h-index

  5. JH
    Junzhou Huang

    The University of Texas at Arlington, United States

    2 publications · 612 citations

    2

    h-index

1–5 of 103

Institutions

51

  1. Icahn School of Medicine at Mount Sinai

    New York, United States

    3 h-index

    4 publications

    149 citations

  2. University of Washington

    Seattle, United States

    2 h-index

    5 publications

    158 citations

  3. Harvard University

    Cambridge, United States

    2 h-index

    2 publications

    612 citations

  4. Shanghai Children's Hospital

    Shanghai, China

    2 h-index

    2 publications

    612 citations

  5. The University of Texas at Arlington

    Arlington, United States

    2 h-index

    2 publications

    612 citations

  6. Shanghai Jiao Tong University

    Shanghai, China

    2 h-index

    4 publications

    1.2K citations

  7. University of Toronto

    Toronto, Canada

    2 h-index

    2 publications

    73 citations

  8. University of Massachusetts Chan Medical School

    Worcester, United States

    2 h-index

    2 publications

    73 citations

1–8 of 51

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 108 citations

    4

    h-index

  2. Nature Machine Intelligence

    2 publications · 649 citations

    2

    h-index

  3. Bioinformatics

    2 publications · 302 citations

    2

    h-index

  4. Nature Communications

    1 publications · 62 citations

    1

    h-index

  5. Diabetes

    1 publications · 480 citations

    1

    h-index

1–5