Concepedia

Transcript Sequence Motif Analysis

Transcript Sequence Motif Analysis is a computational method that identifies statistically significant, recurring nucleotide or amino acid patterns within transcript sequences to infer functional, structural, or regulatory elements distinct from general sequence alignment or annotation approaches.

7

Publications

1.5K

Citations

42

Authors

13

Institutions

Publications per year

2017–2026

3

Parents

Publications

7

SRAMP: prediction of mammalian N<sup>6</sup>-methyladenosine (m<sup>6</sup>A) sites based on sequence-derived features

Yuan Zhou, Pan Zeng, Yanhui Li et al. · Nucleic Acids Research · 2016 · 1.2K citations · Full text

, , +15

SFmap: a web server for motif analysis and prediction of splicing factor binding sites

Isabela Rivera Paz, Martin Akerman, Iris Dror et al. · Nucleic Acids Research · 2010 · 106 citations · Full text

, , +17

Genomewide Analysis of Aryl Hydrocarbon Receptor Binding Targets Reveals an Extensive Array of Gene Clusters that Control Morphogenetic and Developmental Programs

Maureen A. Sartor, Michaël Schnekenburger, Jennifer Marlowe et al. · Environmental Health Perspectives · 2009 · 95 citations · Full text

, , +16

Transcriptomic analysis reveals novel downstream regulatory motifs and highly transcribed virulence factor genes of Entamoeba histolytica

Sarah Naiyer, Jamaluddin Ahamad, Shashi Shekhar Singh et al. · BMC Genomics · 2019 · 27 citations · Full text

, , +17

Towards an in silico analysis of transcription patterns

Stefania Bortoluzzi, Gian Antonio Danieli · Trends in Genetics · 1999 · 25 citations

, , +14

1–5 of 7

Authors

42

  1. SB
    Stefania Bortoluzzi

    University of Padua, Italy

    1 publications · 25 citations

    1

    h-index

  2. PB
    Pierre Baldi

    University of California, Irvine, United States

    1 publications · 18 citations

    1

    h-index

  3. QC
    Qinghua Cui

    Peking University, China

    1 publications · 1.2K citations

    1

    h-index

  4. ZZ
    Ziding Zhang

    China Agricultural University, China

    1 publications · 1.2K citations

    1

    h-index

  5. SB
    Sudha Bhattacharya

    Jawaharlal Nehru University, India

    1 publications · 27 citations

    1

    h-index

1–5 of 42

Institutions

13

  1. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    1 h-index

    4 publications

    424 citations

  2. Statistical Research (United States)

    Redlands, United States

    1 h-index

    3 publications

    285 citations

  3. Novartis (United States)

    New York, United States

    1 h-index

    1 publications

    95 citations

  4. University of Hyderabad

    Hyderabad, India

    1 h-index

    1 publications

    27 citations

  5. University of California, Irvine

    Irvine, United States

    1 h-index

    6 publications

    108 citations

  6. Jawaharlal Nehru University

    New Delhi, India

    1 h-index

    7 publications

    189 citations

  7. Peking University

    Beijing, China

    1 h-index

    4 publications

    5K citations

  8. University of Padua

    Padua, Italy

    1 h-index

    2 publications

    50 citations

1–8 of 13

Venues

  1. Nucleic Acids Research

    2 publications · 1.4K citations

    2

    h-index

  2. BMC Genomics

    2 publications · 46 citations

    2

    h-index

  3. Environmental Health Perspectives

    EHP · 1 publications · 95 citations

    1

    h-index

  4. Trends in Genetics

    TIG · 1 publications · 25 citations

    1

    h-index

  5. Bioinformatics

    1 publications · 18 citations

    1

    h-index

1–5