Concepedia

Supercoiling Modeling

Supercoiling Modeling is a computational or mathematical framework within nucleic acid modeling that specifically characterizes the three-dimensional topological deformations of DNA or RNA arising from torsional stress, distinguishing it from other structural modeling approaches by its focus on writhe, twist, and linking number dynamics.

80

Publications

5.3K

Citations

195

Authors

129

Institutions

Publications per year

2017–2026

10

Parents

Publications

80

Variation of the supercoils in closed circular DNA by binding of antibiotics and drugs: Evidence for molecular models involving intercalation

Michael J. Waring · Journal of Molecular Biology · 1970 · 775 citations

, , +14

Single Strands, Triple Strands, and Kinks in H-DNA

Han Htun, James E. Dahlberg · Science · 1988 · 273 citations

, , +17

Computation of writhe in modeling of supercoiled DNA

Konstantin V. Klenin, Jörg Langowski · Biopolymers · 2000 · 192 citations

, , +17

Elastic rod model of a supercoiled DNA molecule

C. Bouchiat, Marc Mézard · The European Physical Journal E · 2000 · 178 citations · Full text

, , +14

DNA Gyrase and DNA Supercoiling

Martin Gellert, Kiyoshi Mizuuchi, M H O'Dea et al. · Cold Spring Harbor Symposia on Quantitative Biology · 1979 · 175 citations

, , +10

1–5 of 80

Authors

195

  1. CJ
    Craig J. Benham

    University of California, Davis, United States

    5 publications · 299 citations

    5

    h-index

  2. WK
    Wilma K. Olson

    Rutgers, The State University of New Jersey, United States

    4 publications · 295 citations

    4

    h-index

  3. KV
    Konstantin V. Klenin

    German Cancer Research Center, Germany

    4 publications · 412 citations

    4

    h-index

  4. JL
    Jörg Langowski

    German Cancer Research Center, Germany

    4 publications · 443 citations

    4

    h-index

  5. AV
    Alexander V. Vologodskii

    Institute of Molecular Genetics, Russia

    3 publications · 233 citations

    3

    h-index

1–5 of 195

Institutions

129

  1. University of California, Berkeley

    Berkeley, United States

    5 h-index

    12 publications

    878 citations

  2. École Polytechnique Fédérale de Lausanne

    Lausanne, Switzerland

    4 h-index

    14 publications

    995 citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    4 h-index

    18 publications

    400 citations

  4. Rutgers, The State University of New Jersey

    New Brunswick, United States

    3 h-index

    6 publications

    497 citations

  5. Koç University

    Istanbul, Türkiye

    3 h-index

    7 publications

    182 citations

  6. National Institutes of Health

    Bethesda, United States

    3 h-index

    8 publications

    933 citations

  7. Cornell University

    Ithaca, United States

    3 h-index

    9 publications

    278 citations

  8. New York University

    New York, United States

    3 h-index

    6 publications

    594 citations

1–8 of 129

Venues

  1. Biopolymers

    10 publications · 724 citations

    10

    h-index

  2. Nucleic Acids Research

    7 publications · 345 citations

    7

    h-index

  3. Physical Review E

    PRE · 7 publications · 199 citations

    7

    h-index

  4. Biophysical Journal

    6 publications · 347 citations

    6

    h-index

  5. The Journal of Chemical Physics

    5 publications · 312 citations

    5

    h-index

1–5