Strain-Aware Assembly is a metagenome assembly approach that belongs to the class of computational methods designed for reconstructing microbial genomes from complex communities, specifically distinguished by its ability to resolve and differentiate coexisting microbial strains within a species by leveraging subtle variations in sequence composition, coverage patterns, and linkage information.
3
Publications
54
Citations
9
Authors
9
Institutions
Publications per year
2017–2026
2
Parents
Publications
3
OGRE: Overlap Graph-based metagenomic Read clustEring
Marleen Balvert, Xiao Luo, Ernestina Hauptfeld et al. · Bioinformatics · 2020 · 15 citations · Full text
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Authors
9
- AS
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- EH
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- BE
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- JA
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- MB
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1–5 of 9
Institutions
9
Centrum Wiskunde & Informatica
Amsterdam, The Netherlands
3 h-index
7 publications
122 citations
Utrecht University
Utrecht, The Netherlands
2 h-index
5 publications
79 citations
Helmholtz Centre for Infection Research
Braunschweig, Germany
1 h-index
2 publications
40 citations
Vrije Universiteit Amsterdam
Amsterdam, The Netherlands
1 h-index
1 publications
19 citations
Harvard University
Cambridge, United States
1 h-index
1 publications
19 citations
Wageningen University & Research
Wageningen, The Netherlands
1 h-index
1 publications
15 citations
Heinrich Heine University Düsseldorf
Düsseldorf, Germany
1 h-index
2 publications
40 citations
Institut national de recherche en sciences et technologies du numérique
Le Chesnay-Rocquencourt, France
1 h-index
2 publications
38 citations
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Venues
- Bioinformatics
2 publications · 35 citations
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- bioRxiv (Cold Spring Harbor Laboratory)
Repository · 1 publications · 19 citations
1
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- IEEE/ACM Transactions on Computational Biology and Bioinformatics
1 publications · 10 citations
- Nucleic Acids Research
1 publications · 13 citations
- Frontiers in Genetics
1 publications · 14 citations
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