Concepedia

Spike-in Control Evaluation

Spike-In Control Evaluation is a methodological procedure in metagenomic data quality control that involves the introduction of known quantities of exogenous biological or synthetic nucleic acid sequences to assess and calibrate the accuracy, sensitivity, and reproducibility of sequencing and bioinformatic workflows.

22

Publications

1.3K

Citations

161

Authors

74

Institutions

Publications per year

2017–2026

11

Parents

Publications

22

Non-biological synthetic spike-in controls and the AMPtk software pipeline improve mycobiome data

Jonathan Palmer, Michelle A. Jusino, Mark T. Banik et al. · PeerJ · 2018 · 291 citations · Full text

, , +16

The Overlooked Fact: Fundamental Need for Spike-In Control for Virtually All Genome-Wide Analyses

Kaifu Chen, Zheng Hu, Zheng Xia et al. · Molecular and Cellular Biology · 2015 · 231 citations · Full text

, , +13

Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures

Sarah A. Munro, Steven P. Lund, P. Scott Pine et al. · Nature Communications · 2014 · 139 citations · Full text

, , +12

Impact of intravenous heparin on quantification of circulating microRNAs in patients with coronary artery disease

Dorothee Kaudewitz, Regent Lee, Peter Willeit et al. · Thrombosis and Haemostasis · 2013 · 93 citations

, , +16

ChIPseqSpikeInFree: a ChIP-seq normalization approach to reveal global changes in histone modifications without spike-in

Hongjian Jin, Lawryn H. Kasper, Jon D. Larson et al. · Bioinformatics · 2019 · 60 citations · Full text

, , +16

1–5 of 22

Authors

161

  1. YY
    Ying Yu

    Fudan University, China

    2 publications · 182 citations

    2

    h-index

  2. TR
    Tim R. Mercer

    The University of Queensland, Australia

    2 publications · 71 citations

    2

    h-index

  3. LS
    Leming Shi

    National Center for Toxicological Research, United States

    2 publications · 182 citations

    2

    h-index

  4. IW
    Ira W. Deveson

    Garvan Institute of Medical Research, Australia

    2 publications · 71 citations

    2

    h-index

  5. TW
    Ted Wong

    Garvan Institute of Medical Research, Australia

    2 publications · 71 citations

    2

    h-index

1–5 of 161

Institutions

74

  1. Cornell University

    Ithaca, United States

    2 h-index

    6 publications

    1.2K citations

  2. Garvan Institute of Medical Research

    Darlinghurst, Australia

    2 h-index

    12 publications

    476 citations

  3. Fudan University

    Shanghai, China

    2 h-index

    6 publications

    450 citations

  4. Baylor College of Medicine

    Houston, United States

    2 h-index

    3 publications

    489 citations

  5. National Institute of Standards and Technology

    Gaithersburg, United States

    2 h-index

    7 publications

    598 citations

  6. St Vincent's Clinic

    Darlinghurst, Australia

    2 h-index

    7 publications

    286 citations

  7. Queen Mary Hospital

    Hong Kong, China

    1 h-index

    2 publications

    70 citations

  8. Marshfield Clinic

    Marshfield, United States

    1 h-index

    1 publications

    139 citations

1–8 of 74

Venues

  1. BMC Research Notes

    3 publications · 44 citations

    3

    h-index

  2. Nature Communications

    2 publications · 189 citations

    2

    h-index

  3. Bioinformatics

    2 publications · 83 citations

    2

    h-index

  4. Laboratory Medicine

    1 publications · 18 citations

    1

    h-index

  5. BMC Biotechnology

    1 publications · 42 citations

    1

    h-index

1–5