Concepedia

Spatial Gene Expression Analysis

Spatial Gene Expression Analysis is a computational and experimental framework that belongs to the class of spatial transcriptomics methods, distinguished by its ability to quantify gene expression levels within the anatomical context of tissues, thereby preserving the two-dimensional or three-dimensional spatial coordinates of molecular activity.

416

Publications

37.2K

Citations

2.4K

Authors

739

Institutions

Publications per year

2017–2026

333

Parents

Publications

416

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics

Patrik L. Ståhl, Fredrik Salmén, Sanja Vicković et al. · Science · 2016 · 3.9K citations

, , +17

Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex

Kristen R. Maynard, Leonardo Collado‐Torres, Lukas M. Weber et al. · Nature Neuroscience · 2021 · 1.2K citations · Full text

, , +15

High-definition spatial transcriptomics for in situ tissue profiling

Sanja Vicković, Gökçen Eraslan, Fredrik Salmén et al. · Nature Methods · 2019 · 1.2K citations · Full text

, , +14

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

Jian Hu, Xiangjie Li, Kyle Coleman et al. · Nature Methods · 2021 · 1.1K citations

, , +17

Multiplex digital spatial profiling of proteins and RNA in fixed tissue

Christopher R. B. Merritt, Giang T. Ong, S. Church et al. · Nature Biotechnology · 2020 · 1.1K citations

, , +12

1–5 of 416

Authors

2.4K

  1. JL
    Joakim Lundeberg

    KTH Royal Institute of Technology, Sweden

    24 publications · 7.6K citations

    22

    h-index

  2. KR
    Kristen R. Maynard

    Johns Hopkins University, United States

    12 publications · 1.9K citations

    11

    h-index

  3. KM
    Keri Martinowich

    Lieber Institute for Brain Development, United States

    12 publications · 1.9K citations

    11

    h-index

  4. SC
    Stephanie C. Hicks

    Johns Hopkins University, United States

    11 publications · 1.9K citations

    11

    h-index

  5. XZ
    Xiang Zhou

    University of Michigan, United States

    10 publications · 1.6K citations

    10

    h-index

1–5 of 2.4K

Institutions

739

  1. Science for Life Laboratory

    Stockholm, Sweden

    25 h-index

    152 publications

    72.2K citations

  2. KTH Royal Institute of Technology

    Stockholm, Sweden

    24 h-index

    134 publications

    64.6K citations

  3. Stanford University

    Stanford, United States

    18 h-index

    33 publications

    4.6K citations

  4. Karolinska Institutet

    Stockholm, Sweden

    18 h-index

    66 publications

    40.6K citations

  5. Chinese Academy of Sciences

    Beijing, China

    16 h-index

    53 publications

    4.2K citations

  6. Harvard University

    Cambridge, United States

    16 h-index

    41 publications

    5K citations

  7. Johns Hopkins University

    Baltimore, United States

    14 h-index

    143 publications

    23.8K citations

  8. University of Chinese Academy of Sciences

    Beijing, China

    14 h-index

    43 publications

    2.4K citations

1–8 of 739

Venues

  1. Nature Communications

    37 publications · 5K citations

    29

    h-index

  2. Bioinformatics

    27 publications · 1.4K citations

    22

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 50 publications · 1.7K citations

    22

    h-index

  4. Nucleic Acids Research

    18 publications · 1.6K citations

    18

    h-index

  5. Genome biology

    15 publications · 1.5K citations

    16

    h-index

1–5