Concepedia

Smith - Waterman Algorithm

The Smith - Waterman Algorithm is a dynamic programming algorithm for performing local sequence alignment in biological sequences, distinguished from global alignment methods by identifying optimally matching subsequences through the use of zero-score boundaries that allow alignment to restart at mismatches.

296

Publications

44.9K

Citations

864

Authors

343

Institutions

Publications per year

2017–2026

42

Variants

Smith-waterman Algorithm

Parents

Publications

296

Fast and accurate long-read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2010 · 12.9K citations · Full text

, , +16

Accelerated Profile HMM Searches

Sean R. Eddy · PLoS Computational Biology · 2011 · 7.5K citations · Full text

, , +17

KAAS: an automatic genome annotation and pathway reconstruction server

Yuki Moriya, Masumi Itoh, Shujiro Okuda et al. · Nucleic Acids Research · 2007 · 4.3K citations · Full text

, , +17

Multiple Alignment of DNA Sequences with MAFFT

Kazutaka Katoh, George Asimenos, Hiroyuki Toh · Methods in molecular biology · 2009 · 1.5K citations

, , +5

PsRobot: a web-based plant small RNA meta-analysis toolbox

Hua‐Jun Wu, Yingke Ma, Tong Chen et al. · Nucleic Acids Research · 2012 · 618 citations · Full text

, , +17

1–5 of 296

Authors

864

  1. BS
    Bertil Schmidt

    Johannes Gutenberg University Mainz, Germany

    14 publications · 1.3K citations

    13

    h-index

  2. AC
    Alba Cristina Magalhães Alves de Melo

    Universidade de Brasília, Brazil

    8 publications · 341 citations

    8

    h-index

  3. ZA
    Zaid Al-Ars

    Delft University of Technology, Netherlands

    7 publications · 215 citations

    7

    h-index

  4. WL
    Weiguo Liu

    Shandong University, China

    6 publications · 227 citations

    6

    h-index

  5. KB
    Koen Bertels

    Delft University of Technology, Netherlands

    6 publications · 198 citations

    6

    h-index

1–5 of 864

Institutions

343

  1. Delft University of Technology

    Delft, The Netherlands

    11 h-index

    29 publications

    943 citations

  2. Universidade de Brasília

    Brasília, Brazil

    8 h-index

    19 publications

    776 citations

  3. Nanyang Technological University

    Singapore, Singapore

    8 h-index

    28 publications

    3.1K citations

  4. Johannes Gutenberg University Mainz

    Mainz, Germany

    7 h-index

    14 publications

    1.2K citations

  5. University of Edinburgh

    Edinburgh, United Kingdom

    7 h-index

    21 publications

    726 citations

  6. University of California San Diego

    San Diego, United States

    6 h-index

    8 publications

    1.3K citations

  7. European Bioinformatics Institute

    Cambridge, United Kingdom

    5 h-index

    10 publications

    873 citations

  8. National University of Defense Technology

    Changsha, China

    5 h-index

    12 publications

    320 citations

1–8 of 343

Venues

  1. Bioinformatics

    32 publications · 16.3K citations

    24

    h-index

  2. BMC Bioinformatics

    24 publications · 2.2K citations

    20

    h-index

  3. Nucleic Acids Research

    14 publications · 6.1K citations

    14

    h-index

  4. Computer applications in the biosciences

    CABIOS · 7 publications · 313 citations

    7

    h-index

  5. PubMed

    Repository · 6 publications · 387 citations

    6

    h-index

1–5