Concepedia

Sequencing-based Spatial Omics

Sequencing-Based Spatial Omics is a methodological framework within spatial single-cell analysis that integrates high-throughput nucleic acid sequencing with spatial tissue context preservation to enable genome-wide molecular profiling while retaining the precise anatomical localization of individual cells.

7

Publications

217

Citations

56

Authors

17

Institutions

Publications per year

2017–2026

7

Parents

Publications

7

Spatial multi-omics at subcellular resolution via high-throughput in situ pairwise sequencing

Xiaofeng Wu, Weize Xu, Lulu Deng et al. · Nature Biomedical Engineering · 2024 · 61 citations

, , +15

Spatial multi-omics sequencing for fixed tissue via DBiT-seq

Graham Su, Xiaoyu Qin, Archibald Enninful et al. · STAR Protocols · 2021 · 54 citations · Full text

, , +15

Optimal transport for single-cell and spatial omics

Charlotte Bunne, Geoffrey Schiebinger, Andreas Krause et al. · Nature Reviews Methods Primers · 2024 · 54 citations

, , +14

High-Spatial-Resolution Multi-Omics Atlas Sequencing of Mouse Embryos via Deterministic Barcoding in Tissue

Yang Liu, Mingyu Yang, Yanxiang Deng et al. · SSRN Electronic Journal · 2019 · 15 citations · Full text

, , +11

BANKSY: A Spatial Omics Algorithm that Unifies Cell Type Clustering and Tissue Domain Segmentation

Vipul Singhal, Nigel Chou, Joseph Lee et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2022 · 12 citations · Full text

, , +16

1–5 of 7

Authors

56

  1. ZB
    Zhiliang Bai

    Yale University, United States

    4 publications · 90 citations

    4

    h-index

  2. RF
    Rong Fan

    Yale University, United States

    4 publications · 90 citations

    4

    h-index

  3. YL
    Yang Liu

    Yale University, United States

    4 publications · 90 citations

    4

    h-index

  4. GS
    Graham Su

    Yale University, United States

    4 publications · 90 citations

    4

    h-index

  5. YD
    Yanxiang Deng

    Yale University, United States

    4 publications · 90 citations

    4

    h-index

1–5 of 56

Institutions

17

  1. Yale University

    New Haven, United States

    4 h-index

    48 publications

    849 citations

  2. Yale Cancer Center

    New Haven, United States

    3 h-index

    21 publications

    525 citations

  3. Wuhan National Laboratory for Optoelectronics

    Wuhan, China

    1 h-index

    1 publications

    61 citations

  4. University of British Columbia

    Vancouver, Canada

    1 h-index

    1 publications

    54 citations

  5. ETH Zurich

    Zurich, Switzerland

    1 h-index

    2 publications

    108 citations

  6. Singapore Institute for Clinical Sciences

    Singapore, Singapore

    1 h-index

    1 publications

    12 citations

  7. Huazhong University of Science and Technology

    Wuhan, China

    1 h-index

    4 publications

    244 citations

  8. Bioinformatics Institute

    Singapore, Singapore

    1 h-index

    2 publications

    24 citations

1–8 of 17

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 33 citations

    3

    h-index

  2. Nature Biomedical Engineering

    1 publications · 61 citations

    1

    h-index

  3. SSRN Electronic Journal

    Repository · 1 publications · 15 citations

    1

    h-index

  4. Nature Reviews Methods Primers

    1 publications · 54 citations

    1

    h-index

  5. STAR Protocols

    1 publications · 54 citations

    1

    h-index

1–5