Concepedia

Sequence-based Distance Prediction

Sequence-Based Distance Prediction is a computational method in structural bioinformatics that predicts pairwise residue-residue distances in a protein structure exclusively from its amino acid sequence, distinguishing itself from structure-based or coevolutionary methods by relying solely on sequence-derived features and machine learning models.

50

Publications

3.6K

Citations

201

Authors

96

Institutions

Publications per year

2017–2026

22

Parents

Publications

50

De novo protein design by deep network hallucination

Ivan Anishchenko, Samuel J. Pellock, Tamuka M. Chidyausiku et al. · Nature · 2021 · 604 citations · Full text

, , +17

Similarity of phylogenetic trees as indicator of protein–protein interaction

Florencio Pazos, Alfonso Valencia · Protein Engineering Design and Selection · 2001 · 550 citations · Full text

, , +13

A novel method for accurate operon predictions in all sequenced prokaryotes

Morgan N. Price · Nucleic Acids Research · 2005 · 421 citations · Full text

, , +14

Distance-based Support Vector Machine to Predict DNA N6-methyladenine Modification

Haoyu Zhang, Quan Zou, Ying Ju et al. · Current Bioinformatics · 2022 · 316 citations

, , +15

SMOQ: a tool for predicting the absolute residue-specific quality of a single protein model with support vector machines

Renzhi Cao, Zheng Wang, Yiheng Wang et al. · BMC Bioinformatics · 2014 · 105 citations · Full text

, , +12

1–5 of 50

Authors

201

  1. DB
    Dongbo Bu

    Institute of Computing Technology, China

    3 publications · 178 citations

    3

    h-index

  2. JZ
    Jianwei Zhu

    University of Chinese Academy of Sciences, China

    3 publications · 178 citations

    3

    h-index

  3. LK
    Lupeng Kong

    Institute of Theoretical Physics, China

    2 publications · 99 citations

    2

    h-index

  4. SJ
    Samuel J. Pellock

    University of Washington, United States

    2 publications · 692 citations

    2

    h-index

  5. FJ
    Fusong Ju

    Chinese Academy of Sciences, China

    2 publications · 99 citations

    2

    h-index

1–5 of 201

Institutions

96

  1. Chinese Academy of Sciences

    Beijing, China

    5 h-index

    13 publications

    690 citations

  2. Institute of Computing Technology

    Beijing, China

    4 h-index

    9 publications

    496 citations

  3. University of Chinese Academy of Sciences

    Beijing, China

    4 h-index

    11 publications

    595 citations

  4. Technical University of Denmark

    Kongens Lyngby, Denmark

    2 h-index

    7 publications

    96 citations

  5. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    2 publications

    692 citations

  6. Harvard University Press

    Cambridge, United States

    2 h-index

    2 publications

    692 citations

  7. Institute of Theoretical Physics

    Beijing, China

    2 h-index

    2 publications

    99 citations

  8. University of Missouri

    Columbia, United States

    2 h-index

    6 publications

    290 citations

1–8 of 96

Venues

  1. Bioinformatics

    9 publications · 520 citations

    9

    h-index

  2. BMC Bioinformatics

    5 publications · 209 citations

    5

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 4 publications · 143 citations

    4

    h-index

  4. Protein Engineering Design and Selection

    PEDS · 3 publications · 600 citations

    3

    h-index

  5. PubMed

    Repository · 2 publications · 51 citations

    2

    h-index

1–5