Concepedia

Sequence Binning

Sequence Binning is a computational method in genome sequencing informatics that partitions raw sequencing reads or assembled contigs into discrete groups, or bins, based on shared biological origin, typically to infer individual microbial genomes from complex metagenomic samples.

54

Publications

4.4K

Citations

265

Authors

114

Institutions

Publications per year

2017–2026

30

Parents

Publications

54

SqueezeMeta, A Highly Portable, Fully Automatic Metagenomic Analysis Pipeline

Javier Tamames, Fernando Puente‐Sánchez · Frontiers in Microbiology · 2019 · 515 citations · Full text

, , +16

Deciphering the mobility and bacterial hosts of antibiotic resistance genes under antibiotic selection pressure by metagenomic assembly and binning approaches

Renxin Zhao, Ke Yu, Jiayu Zhang et al. · Water Research · 2020 · 364 citations

, , +17

Cellular adhesiveness and cellulolytic capacity in Anaerolineae revealed by omics-based genome interpretation

Yu Xia, Yubo Wang, Yi Wang et al. · Biotechnology for Biofuels · 2016 · 302 citations · Full text

, , +17

Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy

Stefano Campanaro, Laura Treu, Panagiotis Kougias et al. · Biotechnology for Biofuels · 2016 · 299 citations · Full text

, , +17

Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores

Phillip B. Pope, Stuart E. Denman, Martin O. Jones et al. · Proceedings of the National Academy of Sciences · 2010 · 218 citations · Full text

, , +17

1–5 of 54

Authors

265

  1. FY
    Francis Y. L. Chin

    University of Hong Kong, Hong Kong SAR China

    4 publications · 513 citations

    4

    h-index

  2. JB
    Joseph Brown

    Pacific Northwest National Laboratory, United States

    3 publications · 256 citations

    3

    h-index

  3. HC
    Henry C. M. Leung

    University of Hong Kong, Hong Kong SAR China

    3 publications · 211 citations

    3

    h-index

  4. FS
    Fengzhu Sun

    University of Southern California, United States

    3 publications · 287 citations

    3

    h-index

  5. MT
    Mirko Trajkovski

    University of Geneva, Switzerland

    2 publications · 230 citations

    2

    h-index

1–5 of 265

Institutions

114

  1. University of Hong Kong

    Pok Fu Lam, Hong Kong

    5 h-index

    28 publications

    3.1K citations

  2. Pacific Northwest National Laboratory

    Richland, United States

    4 h-index

    22 publications

    1.6K citations

  3. Fudan University

    Shanghai, China

    4 h-index

    11 publications

    739 citations

  4. University of Southern California

    Los Angeles, United States

    3 h-index

    7 publications

    848 citations

  5. The University of Melbourne

    Melbourne, Australia

    3 h-index

    13 publications

    455 citations

  6. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    3 h-index

    5 publications

    473 citations

  7. Centre National de la Recherche Scientifique

    Paris, France

    2 h-index

    3 publications

    128 citations

  8. Australian National University

    Canberra, Australia

    2 h-index

    4 publications

    93 citations

1–8 of 114

Venues

  1. BMC Bioinformatics

    9 publications · 618 citations

    9

    h-index

  2. Bioinformatics

    7 publications · 592 citations

    7

    h-index

  3. BMC Genomics

    3 publications · 162 citations

    3

    h-index

  4. Water Research

    2 publications · 444 citations

    2

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 50 citations

    2

    h-index

1–5