Concepedia

Scoring Functions

"Scoring Function" is a computational model used in molecular docking and protein-protein interaction modeling that belongs to the class of predictive algorithms designed to estimate the binding affinity between biomolecules, distinguished by its specific formulation to quantify the stability and likelihood of a given molecular complex based on physical, statistical, or knowledge-based potentials.

620

Publications

70.9K

Citations

1.9K

Authors

713

Institutions

Publications per year

2017–2026

220

Parents

Publications

620

Scaling and assessment of data quality

Acta Crystallographica Section D Biological Crystallography · 2005 · 4.5K citations · Full text

, , +16

Scoring function for automated assessment of protein structure template quality

Yang Zhang, Jeffrey Skolnick · Proteins Structure Function and Bioinformatics · 2004 · 2.5K citations

, , +9

Toward the estimation of the absolute quality of individual protein structure models

Pascal Benkert, Marco Biasini, Torsten Schwede · Bioinformatics · 2010 · 2.3K citations · Full text

, , +14

Empirical scoring functions: I. The development of a fast empirical scoring function to estimate the binding affinity of ligands in receptor complexes

Matthew Eldridge, Christopher W. Murray, T.R. Auton et al. · Journal of Computer-Aided Molecular Design · 1997 · 1.7K citations

, , +12

Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and bayesian scoring functions

Kim T. Simons, Charles Kooperberg, Enoch S. Huang et al. · Journal of Molecular Biology · 1997 · 1.4K citations

, , +17

1–5 of 620

Authors

1.9K

  1. RW
    Renxiao Wang

    Shanghai Institute of Organic Chemistry, China

    17 publications · 5.7K citations

    16

    h-index

  2. TH
    Tingjun Hou

    Zhejiang University, China

    17 publications · 2.3K citations

    16

    h-index

  3. PJ
    Pedro J. Ballester

    Inserm, France

    12 publications · 2.5K citations

    12

    h-index

  4. CS
    Chao Shen

    Zhejiang University, China

    10 publications · 635 citations

    11

    h-index

  5. ZL
    Zhihai Liu

    Shanghai Institute of Organic Chemistry, China

    10 publications · 2.7K citations

    10

    h-index

1–5 of 1.9K

Institutions

713

  1. Chinese Academy of Sciences

    Beijing, China

    21 h-index

    156 publications

    20.5K citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    20 h-index

    57 publications

    5K citations

  3. Zhejiang University

    Hangzhou, China

    16 h-index

    92 publications

    8.9K citations

  4. Inserm

    Paris, France

    13 h-index

    23 publications

    2.7K citations

  5. University of Missouri

    Columbia, United States

    13 h-index

    42 publications

    3.7K citations

  6. University of Michigan

    Ann Arbor, United States

    11 h-index

    35 publications

    9.9K citations

  7. Shanghai Institute of Organic Chemistry

    Shanghai, China

    11 h-index

    59 publications

    17.3K citations

  8. Pontifícia Universidade Católica do Rio Grande do Sul

    Porto Alegre, Brazil

    10 h-index

    21 publications

    1K citations

1–8 of 713

Venues

  1. Journal of Chemical Information and Modeling

    JCIM · 118 publications · 13.2K citations

    53

    h-index

  2. Proteins Structure Function and Bioinformatics

    56 publications · 7.4K citations

    31

    h-index

  3. Bioinformatics

    32 publications · 5.9K citations

    26

    h-index

  4. Journal of Medicinal Chemistry

    27 publications · 6.5K citations

    26

    h-index

  5. BMC Bioinformatics

    18 publications · 769 citations

    15

    h-index

1–5