Concepedia

Root-mean-square Deviation

Root-Mean-Square Deviation is a metric that quantifies the average magnitude of pairwise distances between corresponding atoms in two structurally aligned macromolecular conformations, serving as a standard measure of structural divergence in three-dimensional molecular superposition.

1.7K

Publications

114.4K

Citations

5.9K

Authors

1.9K

Institutions

Publications per year

2017–2026

487

Variants

Rmsd

Parents

Publications

1.7K

Closed-form solution of absolute orientation using unit quaternions

Berthold K. P. Horn · Journal of the Optical Society of America A · 1987 · 4.1K citations

, , +16

TM-align: a protein structure alignment algorithm based on the TM-score

Yang Zhang · Nucleic Acids Research · 2005 · 4K citations · Full text

, , +15

Examination of the secondary structure of proteins by deconvolved FTIR spectra

D. Michael Byler, H. Susi · Biopolymers · 1986 · 3K citations

, , +14

Very fast empirical prediction and rationalization of protein pK<sub>a</sub> values

Hui Li, Andrew D. Robertson, Jan H. Jensen · Proteins Structure Function and Bioinformatics · 2005 · 2.1K citations

, , +13

Computational Thermochemistry: Scale Factor Databases and Scale Factors for Vibrational Frequencies Obtained from Electronic Model Chemistries

I. M. Alecu, Jingjing Zheng, Yan Zhao et al. · Journal of Chemical Theory and Computation · 2010 · 1.6K citations · Full text

, , +16

1–5 of 1.7K

Authors

5.9K

  1. PP
    PooGyeon Park

    Pohang University of Science and Technology, South Korea

    11 publications · 480 citations

    10

    h-index

  2. FS
    Faiyaz Shakeel

    King Saud University, Saudi Arabia

    9 publications · 284 citations

    9

    h-index

  3. FY
    Fábio Yuzo Nakamura

    Universidade Estadual de Londrina, Brazil

    9 publications · 422 citations

    9

    h-index

  4. AA
    Andrew A. Flatt

    University of Alabama, United States

    8 publications · 353 citations

    8

    h-index

  5. NH
    Nazrul Haq

    King Saud University, Saudi Arabia

    8 publications · 205 citations

    8

    h-index

1–5 of 5.9K

Institutions

1.9K

  1. Centre National de la Recherche Scientifique

    Paris, France

    21 h-index

    101 publications

    7.3K citations

  2. Chinese Academy of Sciences

    Beijing, China

    18 h-index

    74 publications

    4.8K citations

  3. Columbia University

    New York, United States

    18 h-index

    48 publications

    9K citations

  4. Pohang University of Science and Technology

    Pohang, South Korea

    15 h-index

    54 publications

    2.6K citations

  5. University of Cambridge

    Cambridge, United Kingdom

    14 h-index

    43 publications

    2.3K citations

  6. The Ohio State University

    Columbus, United States

    14 h-index

    30 publications

    1.4K citations

  7. The University of Tokyo

    Tokyo, Japan

    13 h-index

    50 publications

    1.5K citations

  8. The University of Osaka

    Osaka, Japan

    13 h-index

    48 publications

    2.2K citations

1–8 of 1.9K

Venues

  1. Proteins Structure Function and Bioinformatics

    59 publications · 6.5K citations

    38

    h-index

  2. The Journal of Chemical Physics

    53 publications · 2.8K citations

    32

    h-index

  3. Journal of Chemical & Engineering Data

    66 publications · 2.6K citations

    28

    h-index

  4. Journal of Chemical Information and Modeling

    JCIM · 38 publications · 3.8K citations

    27

    h-index

  5. Journal of Computational Chemistry

    26 publications · 3.5K citations

    22

    h-index

1–5