Concepedia

Repeat Masking

Repeat Masking is a computational genomic preprocessing technique that identifies and obscures repetitive DNA sequences within a genome to prevent their interference in downstream analyses such as gene annotation or sequence alignment.

21

Publications

3.2K

Citations

101

Authors

46

Institutions

Publications per year

2017–2026

6

Parents

Publications

21

Using <scp>Repeat</scp><scp>Masker</scp> to Identify Repetitive Elements in Genomic Sequences

Nansheng Chen · Current Protocols in Bioinformatics · 2004 · 905 citations

, , +11

Primer3_masker: integrating masking of template sequence with primer design software

Triinu Kõressaar, Maarja Lepamets, Lauris Kaplinski et al. · Bioinformatics · 2018 · 593 citations · Full text

, , +10

WindowMasker: window-based masker for sequenced genomes

Aleksandr Morgulis, E. Michael Gertz, Alejandro A. Schäffer et al. · Bioinformatics · 2005 · 364 citations

, , +12

<i>MaskerAid</i> : a performance enhancement to RepeatMasker

Joseph A. Bedell, Ian Korf, Warren Gish · Bioinformatics · 2000 · 283 citations · Full text

, , +8

A new repeat-masking method enables specific detection of homologous sequences

Martin C. Frith · Nucleic Acids Research · 2010 · 230 citations · Full text

, , +15

1–5 of 21

Authors

101

  1. MR
    Maido Remm

    University of Tartu, Estonia

    3 publications · 660 citations

    3

    h-index

  2. RA
    Reidar Andreson

    University of Tartu, Estonia

    3 publications · 660 citations

    3

    h-index

  3. LK
    Lauris Kaplinski

    University of Tartu, Estonia

    2 publications · 637 citations

    2

    h-index

  4. IJ
    Inge Jonassen

    University of Bergen, Norway

    2 publications · 32 citations

    2

    h-index

  5. KM
    Ketil Malde

    Norwegian Institute of Marine Research, Norway

    2 publications · 32 citations

    2

    h-index

1–5 of 101

Institutions

46

  1. University of Tartu

    Tartu, Estonia

    3 h-index

    12 publications

    3.8K citations

  2. University of Bergen

    Bergen, Norway

    2 h-index

    5 publications

    83 citations

  3. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    2 h-index

    3 publications

    933 citations

  4. Estonian Biocentre

    Tartu, Estonia

    2 h-index

    4 publications

    134 citations

  5. Genomic (Brazil)

    São Paulo, Brazil

    1 h-index

    1 publications

    48 citations

  6. National University of Singapore

    Singapore, Singapore

    1 h-index

    4 publications

    252 citations

  7. Agricultural Research Service

    Washington, United States

    1 h-index

    1 publications

    71 citations

  8. Washington University in St. Louis

    St Louis, United States

    1 h-index

    3 publications

    849 citations

1–8 of 46

Venues

  1. Nucleic Acids Research

    6 publications · 581 citations

    6

    h-index

  2. Bioinformatics

    4 publications · 1.3K citations

    4

    h-index

  3. The Plant Genome

    2 publications · 39 citations

    2

    h-index

  4. G3 Genes Genomes Genetics

    1 publications · 94 citations

    1

    h-index

  5. BMC Genomics

    1 publications · 13 citations

    1

    h-index

1–5