Concepedia

Pseudotime Trajectory Analysis

Pseudotime Trajectory Analysis is a computational method in transcriptomic heterogeneity research that infers the progression of cells along dynamic biological processes by ordering single-cell transcriptomes on a pseudotemporal continuum based on transcriptional similarity, thereby reconstructing developmental or regulatory trajectories without explicit time-series data.

68

Publications

3.5K

Citations

602

Authors

234

Institutions

Publications per year

2017–2026

68

Parents

Publications

68

Dynamics of Gene Expression in Single Root Cells of <i>Arabidopsis thaliana</i>

Ken Jean-Baptiste, José L. McFaline‐Figueroa, Cristina M Alexandre et al. · The Plant Cell · 2019 · 437 citations · Full text

, , +17

Single-Cell Transcriptomic Profiling of Vascular Smooth Muscle Cell Phenotype Modulation in Marfan Syndrome Aortic Aneurysm

Albert J Pedroza, Yasushi Tashima, Rohan Shad et al. · Arteriosclerosis Thrombosis and Vascular Biology · 2020 · 202 citations · Full text

, , +15

Surveying brain tumor heterogeneity by single-cell RNA-sequencing of multi-sector biopsies

Kai Yu, Yuqiong Hu, Fan Wu et al. · National Science Review · 2020 · 193 citations · Full text

, , +17

Uncovering pseudotemporal trajectories with covariates from single cell and bulk expression data

Kieran R. Campbell, Christopher Yau · Nature Communications · 2018 · 141 citations · Full text

, , +17

Single‐cell RNA‐seq describes the transcriptome landscape and identifies critical transcription factors in the leaf blade of the allotetraploid peanut (<i>Arachis hypogaea</i> L.)

Hao Liu, Hao Liu, Dongxiu Hu et al. · Plant Biotechnology Journal · 2021 · 114 citations · Full text

, , +16

1–5 of 68

Authors

602

  1. HJ
    Hongkai Ji

    Johns Hopkins University, United States

    2 publications · 111 citations

    2

    h-index

  2. ZJ
    Zhicheng Ji

    Johns Hopkins University, United States

    2 publications · 111 citations

    2

    h-index

  3. YC
    Yunshun Chen

    The University of Melbourne, Australia

    2 publications · 30 citations

    2

    h-index

  4. TT
    Tianhai Tian

    Monash University, Australia

    2 publications · 35 citations

    2

    h-index

  5. EJ
    E. John Wherry

    University of Pennsylvania, United States

    2 publications · 111 citations

    2

    h-index

1–5 of 602

Institutions

234

  1. Sun Yat-sen University

    Guangzhou, China

    4 h-index

    12 publications

    289 citations

  2. Johns Hopkins University

    Baltimore, United States

    4 h-index

    9 publications

    495 citations

  3. Zhejiang University

    Hangzhou, China

    3 h-index

    11 publications

    804 citations

  4. Harbin Medical University

    Harbin, China

    3 h-index

    34 publications

    758 citations

  5. Chongqing Medical University

    Chongqing, China

    3 h-index

    12 publications

    316 citations

  6. Shanghai Jiao Tong University

    Shanghai, China

    3 h-index

    10 publications

    406 citations

  7. University of Science and Technology of China

    Hefei, China

    3 h-index

    24 publications

    597 citations

  8. Zhongnan University of Economics and Law

    Wuhan, China

    2 h-index

    2 publications

    35 citations

1–8 of 234

Venues

  1. Nature Communications

    8 publications · 526 citations

    8

    h-index

  2. Journal of Translational Medicine

    JTM · 5 publications · 174 citations

    5

    h-index

  3. Science Advances

    3 publications · 211 citations

    3

    h-index

  4. Bioinformatics

    3 publications · 182 citations

    3

    h-index

  5. F1000Research

    2 publications · 30 citations

    2

    h-index

1–5