Concepedia

Proteomics-constrained Modeling

Proteomics-Constrained Modeling is a genome-scale metabolic modeling approach that integrates quantitative proteomics data to constrain reaction fluxes, thereby refining model predictions by ensuring consistency between enzyme abundance and metabolic capacity.

12

Publications

739

Citations

65

Authors

44

Institutions

Publications per year

2017–2026

8

Parents

Publications

12

Constrained Allocation Flux Balance Analysis

Matteo Mori, Terence Hwa, Olivier Martin et al. · PLoS Computational Biology · 2016 · 188 citations · Full text

, , +15

Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0

Iván Domenzain, Benjamín J. Sánchez, Mihail Anton et al. · Nature Communications · 2022 · 142 citations · Full text

, , +17

Improving recombinant protein production by yeast through genome-scale modeling using proteome constraints

Feiran Li, Yu Chen, Qi Qi et al. · Nature Communications · 2022 · 81 citations · Full text

, , +13

Proteome constraints reveal targets for improving microbial fitness in nutrient‐rich environments

Yu Chen, Eunice van Pelt‐KleinJan, Berdien van Olst et al. · Molecular Systems Biology · 2021 · 78 citations · Full text

, , +15

Proteomic and network analysis characterize stage-specific metabolism in Trypanosoma cruzi

Seth B. Roberts, Jennifer L Robichaux, Arvind K. Chavali et al. · BMC Systems Biology · 2009 · 47 citations · Full text

, , +17

1–5 of 12

Authors

65

  1. JN
    Jens Nielsen

    Chalmers University of Technology, Sweden

    5 publications · 340 citations

    5

    h-index

  2. EJ
    Eduard J. Kerkhoven

    Chalmers University of Technology, Sweden

    4 publications · 262 citations

    4

    h-index

  3. VS
    Verena Siewers

    Chalmers University of Technology, Sweden

    3 publications · 181 citations

    3

    h-index

  4. ID
    Iván Domenzain

    Chalmers University of Technology, Sweden

    3 publications · 181 citations

    3

    h-index

  5. AM
    Aarón Millán-Oropeza

    Université Paris-Saclay, France

    3 publications · 181 citations

    3

    h-index

1–5 of 65

Institutions

44

  1. Chalmers University of Technology

    Gothenburg, Sweden

    5 h-index

    28 publications

    1.9K citations

  2. Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement

    Paris, France

    4 h-index

    6 publications

    534 citations

  3. Technical University of Denmark

    Kongens Lyngby, Denmark

    4 h-index

    8 publications

    456 citations

  4. BioInnovation Institute

    Copenhagen, Denmark

    4 h-index

    4 publications

    324 citations

  5. Novo Nordisk Foundation

    Copenhagen, Denmark

    4 h-index

    4 publications

    287 citations

  6. Microbiologie de l’alimentation au service de la santé

    Orsay, France

    3 h-index

    6 publications

    362 citations

  7. Université Paris-Saclay

    Gif-sur-Yvette, France

    3 h-index

    5 publications

    518 citations

  8. Vrije Universiteit Amsterdam

    Amsterdam, The Netherlands

    2 h-index

    6 publications

    429 citations

1–8 of 44

Venues

  1. PLoS Computational Biology

    2 publications · 211 citations

    2

    h-index

  2. BMC Systems Biology

    2 publications · 92 citations

    2

    h-index

  3. Nature Communications

    2 publications · 223 citations

    2

    h-index

  4. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 23 citations

    1

    h-index

  5. Scientific Reports

    1 publications · 44 citations

    1

    h-index

1–5