Concepedia

Protein Term Recognition

Protein Term Recognition is a computational natural language processing task that identifies and classifies named entities referring to proteins within biological text, distinguishing it from related entity recognition tasks by its specific focus on protein nomenclature and terminologies in scientific literature.

16

Publications

1.3K

Citations

52

Authors

24

Institutions

Publications per year

2017–2026

1

Parents

Publications

16

Toward information extraction: identifying protein names from biological papers.

Ken Fukuda, Akihiro Tamura, Tatsuhiko Tsunoda et al. · PubMed · 1998 · 495 citations

, , +16

Extracting the names of genes and gene products with a hidden Markov model

Nigel Collier, Chikashi Nobata, Jun’ichi Tsujii · 2000 · 249 citations · Full text

, , +17

PLAYING BIOLOGY'S NAME GAME: IDENTIFYING PROTEIN NAMES IN SCIENTIFIC TEXT

Daniel Hanisch, Juliane Fluck, Heinz‐Theodor Mevissen et al. · 2002 · 113 citations

, , +14

Boosting precision and recall of dictionary-based protein name recognition

Yoshimasa Tsuruoka, Jun’ichi Tsujii · 2003 · 104 citations · Full text

, , +17

OntoGene in BioCreative II.5

Fabio Rinaldi, G. Schneider, Kaarel Kaljurand et al. · IEEE/ACM Transactions on Computational Biology and Bioinformatics · 2010 · 75 citations

, , +17

1–5 of 16

Authors

52

  1. YT
    Yoshimasa Tsuruoka

    The University of Tokyo, Japan

    3 publications · 174 citations

    3

    h-index

  2. JT
    Jun’ichi Tsujii

    The University of Tokyo, Japan

    3 publications · 376 citations

    3

    h-index

  3. JM
    John McNaught

    University of Manchester, United Kingdom

    2 publications · 70 citations

    2

    h-index

  4. WH
    Wen-Juan Hou

    National Taiwan University, Taiwan

    2 publications · 24 citations

    2

    h-index

  5. HC
    Hsin‐Hsi Chen

    National Taiwan University, Taiwan

    2 publications · 24 citations

    2

    h-index

1–5 of 52

Institutions

24

  1. The University of Tokyo

    Tokyo, Japan

    4 h-index

    7 publications

    1.5K citations

  2. National Taiwan University

    Taipei, Taiwan

    2 h-index

    4 publications

    48 citations

  3. University of Manchester

    Manchester, United Kingdom

    2 h-index

    8 publications

    280 citations

  4. Research Organization of Information and Systems

    Tokyo, Japan

    1 h-index

    1 publications

    23 citations

  5. Indiana University

    Bloomington, United States

    1 h-index

    1 publications

    11 citations

  6. ID Genomics (United States)

    Seattle, United States

    1 h-index

    1 publications

    33 citations

  7. Cornell University

    Ithaca, United States

    1 h-index

    2 publications

    66 citations

  8. Cardiovascular Institute of the South

    Houma, United States

    1 h-index

    2 publications

    54 citations

1–8 of 24

Venues

  1. BMC Bioinformatics

    2 publications · 90 citations

    2

    h-index

  2. PubMed

    Repository · 1 publications · 495 citations

    1

    h-index

  3. Journal of Biomedical Informatics

    1 publications · 13 citations

    1

    h-index

  4. Journal of Proteome Research

    JPR · 1 publications · 27 citations

    1

    h-index

  5. Journal of the American Medical Informatics Association

    JAMIA · 1 publications · 33 citations

    1

    h-index

1–5