Concepedia

Protein Complex Benchmarking

Protein Complex Benchmarking is the systematic evaluation of computational methods for predicting protein complex structures by measuring their performance against standardized datasets, metrics, and criteria to assess accuracy, robustness, and generalizability within structural bioinformatics.

34

Publications

2.7K

Citations

183

Authors

95

Institutions

Publications per year

2017–2026

18

Parents

Publications

34

Boltz-1 Democratizing Biomolecular Interaction Modeling

Jeremy Wohlwend, Gabriele Corso, Saro Passaro et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2024 · 409 citations · Full text

, , +15

A core-attachment based method to detect protein complexes in PPI networks

Min Wu, Xiaoli Li, Chee Keong Kwoh et al. · BMC Bioinformatics · 2009 · 380 citations · Full text

, , +16

Benchmarking <scp>AlphaFold</scp> for protein complex modeling reveals accuracy determinants

Rui Yin, Brandon Y. Feng, Amitabh Varshney et al. · Protein Science · 2022 · 358 citations · Full text

, , +17

Comparative Assessment of Scoring Functions on an Updated Benchmark: 1. Compilation of the Test Set

Yan Li, Zhihai Liu, Jie Li et al. · Journal of Chemical Information and Modeling · 2014 · 229 citations

, , +17

CSAR Benchmark Exercise of 2010: Combined Evaluation Across All Submitted Scoring Functions

Richard D. Smith, James B. Dunbar, Peter M.U. Ung et al. · Journal of Chemical Information and Modeling · 2011 · 149 citations · Full text

, , +17

1–5 of 34

Authors

183

  1. TS
    Torsten Schwede

    University of Basel, Switzerland

    4 publications · 207 citations

    4

    h-index

  2. GT
    Gerardo Tauriello

    SIB Swiss Institute of Bioinformatics, Switzerland

    3 publications · 184 citations

    3

    h-index

  3. PJ
    Petras J. Kundrotas

    University of Kansas, United States

    2 publications · 87 citations

    2

    h-index

  4. XR
    Xavier Robin

    SIB Swiss Institute of Bioinformatics, Switzerland

    2 publications · 140 citations

    2

    h-index

  5. YZ
    Yang Zhang

    University of Michigan, United States

    2 publications · 92 citations

    2

    h-index

1–5 of 183

Institutions

95

  1. University of Basel

    Basel, Switzerland

    4 h-index

    18 publications

    1K citations

  2. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    4 h-index

    18 publications

    1K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    3 h-index

    9 publications

    338 citations

  4. Utrecht University

    Utrecht, The Netherlands

    3 h-index

    5 publications

    163 citations

  5. University of Michigan

    Ann Arbor, United States

    3 h-index

    16 publications

    1.9K citations

  6. Nanyang Technological University

    Singapore, Singapore

    3 h-index

    6 publications

    833 citations

  7. Freie Universität Berlin

    Berlin, Germany

    3 h-index

    5 publications

    153 citations

  8. VIB-VUB Center for Structural Biology

    Brussels, Belgium

    2 h-index

    2 publications

    66 citations

1–8 of 95

Venues

  1. Journal of Chemical Information and Modeling

    JCIM · 5 publications · 601 citations

    5

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 513 citations

    3

    h-index

  3. 3

    h-index

  4. Nucleic Acids Research

    4 publications · 194 citations

    3

    h-index

  5. Protein Science

    PS · 2 publications · 440 citations

    2

    h-index

1–5