Concepedia

Pause Site Recognition

Pause Site Recognition is a computational or experimental method that identifies specific genomic locations where RNA polymerase II halts transcription elongation, distinguished by its focus on detecting the precise nucleotide positions and regulatory contexts associated with transcriptional pausing.

48

Publications

4.1K

Citations

158

Authors

62

Institutions

Publications per year

2017–2026

4

Parents

Publications

48

A pause sequence enriched at translation start sites drives transcription dynamics in vivo

Matthew H. Larson, Rachel A. Mooney, Jason M. Peters et al. · Science · 2014 · 344 citations

, , +16

Transcription on nucleosomal templates by RNA polymerase II in vitro: inhibition of elongation with enhancement of sequence-specific pausing.

Michael G. Izban, Donal S. Luse · Genes & Development · 1991 · 245 citations · Full text

, , +17

A Central Role of the RNA Polymerase Trigger Loop in Active-Site Rearrangement during Transcriptional Pausing

Innokenti Toulokhonov, Jinwei Zhang, Murali Palangat et al. · Molecular Cell · 2007 · 205 citations · Full text

, , +16

Elongation factor-dependent transcript shortening by template-engaged RNA polymerase II.

Daniel Reines · Journal of Biological Chemistry · 1992 · 197 citations · Full text

, , +17

Interactions between RNA polymerase and the “core recognition element” counteract pausing

Irina O. Vvedenskaya, Hanif Vahedian-Movahed, Jeremy G. Bird et al. · Science · 2014 · 188 citations

, , +17

1–5 of 48

Authors

158

  1. RL
    Robert Landick

    University of Wisconsin–Madison, United States

    10 publications · 1.2K citations

    10

    h-index

  2. TA
    Tricia A. Windgassen

    University of Wisconsin–Madison, United States

    3 publications · 486 citations

    3

    h-index

  3. RA
    Robert A. Bambara

    University of Rochester, United States

    3 publications · 255 citations

    3

    h-index

  4. RA
    Rachel A. Mooney

    University of Wisconsin–Madison, United States

    3 publications · 486 citations

    3

    h-index

  5. DN
    Dhananjaya Nayak

    University of Wisconsin–Madison, United States

    3 publications · 486 citations

    3

    h-index

1–5 of 158

Institutions

62

  1. University of Wisconsin–Madison

    Madison, United States

    7 h-index

    24 publications

    3.5K citations

  2. Washington University in St. Louis

    St Louis, United States

    4 h-index

    6 publications

    619 citations

  3. Pennsylvania State University

    State College, United States

    3 h-index

    10 publications

    457 citations

  4. University of Rochester

    Rochester, United States

    3 h-index

    7 publications

    721 citations

  5. Stanford University

    Stanford, United States

    3 h-index

    6 publications

    998 citations

  6. Cornell University

    Ithaca, United States

    3 h-index

    10 publications

    1.1K citations

  7. Technion – Israel Institute of Technology

    Haifa, Israel

    2 h-index

    3 publications

    85 citations

  8. University of California, Los Angeles

    Los Angeles, United States

    2 h-index

    4 publications

    88 citations

1–8 of 62

Venues

  1. Journal of Biological Chemistry

    JBC · 7 publications · 582 citations

    7

    h-index

  2. Molecular and Cellular Biology

    MCB · 7 publications · 478 citations

    7

    h-index

  3. Journal of Molecular Biology

    JMB · 6 publications · 485 citations

    6

    h-index

  4. Nucleic Acids Research

    5 publications · 115 citations

    5

    h-index

  5. Genes & Development

    3 publications · 473 citations

    3

    h-index

1–5