Concepedia

Pathway Representation Formats

Pathway Representation Formats is a standardized schema that specifies the syntax and semantics for encoding biological pathways, enabling computational interpretation and exchange of pathway data through structured, machine-readable formats.

35

Publications

1.7K

Citations

156

Authors

64

Institutions

Publications per year

2017–2026

5

Parents

Publications

35

Presenting and exploring biological pathways with PathVisio

Martijn van Iersel, Thomas Kelder, Alexander R. Pico et al. · BMC Bioinformatics · 2008 · 364 citations · Full text

, , +13

TRANSPATH(R): an information resource for storing and visualizing signaling pathways and their pathological aberrations

Mathias Krull · Nucleic Acids Research · 2005 · 166 citations · Full text

, , +17

Representations of molecular pathways: an evaluation of SBML, PSI MI and BioPAX

Lena Strömbäck, Patrick Lambrix · Bioinformatics · 2005 · 152 citations · Full text

, , +11

cPath: open source software for collecting, storing, and querying biological pathways

Ethan Cerami, Gary D. Bader, Chris Sander · BMC Bioinformatics · 2006 · 126 citations · Full text

, , +15

VisANT 3.0: new modules for pathway visualization, editing, prediction and construction

Zhenjun Hu, David Ng, Takuji Yamada et al. · Nucleic Acids Research · 2007 · 77 citations · Full text

, , +17

1–5 of 35

Authors

156

  1. AZ
    Andreas Zell

    University of Tübingen, Germany

    4 publications · 194 citations

    4

    h-index

  2. AD
    Andreas Dräger

    University of Tübingen, Germany

    4 publications · 194 citations

    4

    h-index

  3. ED
    Emek Demir

    Oregon Health & Science University, United States

    4 publications · 121 citations

    4

    h-index

  4. PG
    Peter Ghazal

    University of Edinburgh, United Kingdom

    3 publications · 61 citations

    3

    h-index

  5. CW
    Clemens Wrzodek

    University of Tübingen, Germany

    3 publications · 164 citations

    3

    h-index

1–5 of 156

Institutions

64

  1. Memorial Sloan Kettering Cancer Center

    New York, United States

    3 h-index

    14 publications

    563 citations

  2. National Academy of Sciences of Armenia

    Yerevan, Armenia

    3 h-index

    6 publications

    176 citations

  3. University of Tübingen

    Tübingen, Germany

    3 h-index

    17 publications

    818 citations

  4. Institute of Molecular Biology

    Yerevan, Armenia

    3 h-index

    6 publications

    176 citations

  5. University of Toronto

    Toronto, Canada

    2 h-index

    2 publications

    159 citations

  6. Gladstone Institutes

    San Francisco, United States

    2 h-index

    5 publications

    1.2K citations

  7. Wayne State University

    Detroit, United States

    2 h-index

    11 publications

    290 citations

  8. Maastricht University

    Maastricht, The Netherlands

    2 h-index

    8 publications

    1.7K citations

1–8 of 64

Venues

  1. Bioinformatics

    12 publications · 527 citations

    12

    h-index

  2. Nucleic Acids Research

    4 publications · 299 citations

    4

    h-index

  3. BMC Bioinformatics

    3 publications · 506 citations

    3

    h-index

  4. BMC Systems Biology

    2 publications · 85 citations

    2

    h-index

  5. F1000Research

    2 publications · 50 citations

    2

    h-index

1–5