Concepedia

Pathway Interoperability

Pathway Interoperability is a formal framework enabling consistent integration, exchange, and interpretation of biological pathway data across distinct databases and analytical tools through standardized data formats, ontologies, and computational interfaces.

13

Publications

1.3K

Citations

184

Authors

78

Institutions

Publications per year

2017–2026

4

Parents

Publications

13

The BioPAX community standard for pathway data sharing

Emek Demir, Michael P. Cary, Suzanne Paley et al. · Nature Biotechnology · 2010 · 756 citations · Full text

, , +13

BioWarehouse: a bioinformatics database warehouse toolkit

Thomas J. Lee, Yannick Pouliot, Valerie Wagner et al. · BMC Bioinformatics · 2006 · 181 citations · Full text

, , +15

Consistency, comprehensiveness, and compatibility of pathway databases

Donny Soh, Difeng Dong, Yike Guo et al. · BMC Bioinformatics · 2010 · 80 citations · Full text

, , +16

PathMe: merging and exploring mechanistic pathway knowledge

Daniel Domingo‐Fernándéz, Sarah Mubeen, Josep Marín-Llaó et al. · BMC Bioinformatics · 2019 · 58 citations · Full text

, , +17

Integrating BioPAX pathway knowledge with SBML models

Oliver Ruebenacker, Ion I. Moraru, James C. Schaff et al. · IET Systems Biology · 2009 · 32 citations

, , +15

1–5 of 13

Authors

184

  1. JR
    Jonathan Rees

    Massachusetts Institute of Technology, United States

    3 publications · 53 citations

    3

    h-index

  2. JZ
    Jeremy Zucker

    Pacific Northwest National Laboratory, United States

    3 publications · 784 citations

    3

    h-index

  3. PD
    Peter D. Karp

    SRI International, United States

    3 publications · 954 citations

    3

    h-index

  4. JL
    Joanne Luciano

    Rensselaer Polytechnic Institute, United States

    3 publications · 798 citations

    3

    h-index

  5. AR
    Alan Ruttenberg

    University at Buffalo, State University of New York, United States

    3 publications · 53 citations

    3

    h-index

1–5 of 184

Institutions

78

  1. UConn Health

    Farmington, United States

    2 h-index

    6 publications

    1.6K citations

  2. Cornell University

    Ithaca, United States

    2 h-index

    4 publications

    807 citations

  3. Menlo School

    Atherton, United States

    2 h-index

    5 publications

    3.2K citations

  4. Universitätsmedizin Göttingen

    Göttingen, Germany

    2 h-index

    4 publications

    68 citations

  5. SRI International

    Menlo Park, United States

    2 h-index

    10 publications

    4.1K citations

  6. United States Food and Drug Administration

    Silver Spring, United States

    1 h-index

    1 publications

    756 citations

  7. Ghent University

    Ghent, Belgium

    1 h-index

    1 publications

    17 citations

  8. Bonn Aachen International Center for Information Technology

    Bonn, Germany

    1 h-index

    4 publications

    232 citations

1–8 of 78

Venues

  1. BMC Bioinformatics

    3 publications · 319 citations

    3

    h-index

  2. IET Systems Biology

    1 publications · 32 citations

    1

    h-index

  3. Genes

    1 publications · 17 citations

    1

    h-index

  4. Computer Methods and Programs in Biomedicine

    1 publications · 32 citations

    1

    h-index

  5. Nature Biotechnology

    1 publications · 756 citations

    1

    h-index

1–5