Concepedia

Low-coverage Sequencing Imputation

Low-Coverage Sequencing Imputation is a genotype imputation method that infers unobserved genotypes in low-coverage sequencing data by leveraging haplotype reference panels and probabilistic modeling to distinguish it from imputation approaches designed for high-coverage or genotyping array data.

34

Publications

2.7K

Citations

240

Authors

117

Institutions

Publications per year

2017–2026

23

Parents

Publications

34

Efficient phasing and imputation of low-coverage sequencing data using large reference panels

Simone Rubinacci, Diogo M. Ribeiro, Robin J. Hofmeister et al. · Nature Genetics · 2021 · 505 citations

, , +17

Extremely low-coverage sequencing and imputation increases power for genome-wide association studies

Bogdan Paşaniuc, Nadin Rohland, Paul J. McLaren et al. · Nature Genetics · 2012 · 329 citations

, , +13

Novel Methods to Optimize Genotypic Imputation for Low‐Coverage, Next‐Generation Sequence Data in Crop Plants

Kelly Swarts, Huihui Li, J. Alberto Romero Navarro et al. · The Plant Genome · 2014 · 283 citations · Full text

, , +15

Imputation of low-coverage sequencing data from 150,119 UK Biobank genomes

Simone Rubinacci, Robin J. Hofmeister, Bárbara Sousa da Mota et al. · Nature Genetics · 2023 · 158 citations · Full text

, , +16

Fast imputation using medium or low-coverage sequence data

P.M. VanRaden, Chuanyu Sun, Jeffrey R. O’Connell · BMC Genetics · 2015 · 98 citations · Full text

, , +13

1–5 of 34

Authors

240

  1. SR
    Simone Rubinacci

    University of Lausanne, Switzerland

    5 publications · 723 citations

    5

    h-index

  2. OD
    Olivier Delaneau

    SIB Swiss Institute of Bioinformatics, Switzerland

    5 publications · 723 citations

    5

    h-index

  3. RJ
    Robin J. Hofmeister

    University of Lausanne, Switzerland

    4 publications · 702 citations

    4

    h-index

  4. JK
    Joseph K. Pickrell

    New York Genome Center, United States

    3 publications · 188 citations

    3

    h-index

  5. CN
    Chao Ning

    China Agricultural University, China

    3 publications · 71 citations

    3

    h-index

1–5 of 240

Institutions

117

  1. University of Lausanne

    Lausanne, Switzerland

    5 h-index

    20 publications

    2.9K citations

  2. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    5 h-index

    20 publications

    2.9K citations

  3. Agricultural Research Service

    Washington, United States

    3 h-index

    6 publications

    483 citations

  4. Shandong Agricultural University

    Tai’an, China

    3 h-index

    22 publications

    478 citations

  5. GenVec

    Gaithersburg, United States

    3 h-index

    11 publications

    659 citations

  6. North Carolina State University

    Raleigh, United States

    2 h-index

    2 publications

    88 citations

  7. Roslin Institute

    Dalkeith, United Kingdom

    2 h-index

    10 publications

    636 citations

  8. University of Wisconsin–Madison

    Madison, United States

    2 h-index

    4 publications

    92 citations

1–8 of 117

Venues

  1. Nature Genetics

    4 publications · 1K citations

    4

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 52 citations

    3

    h-index

  3. Genetics Selection Evolution

    GSE · 3 publications · 127 citations

    3

    h-index

  4. Genetics

    3 publications · 144 citations

    3

    h-index

  5. BMC Genetics

    2 publications · 156 citations

    2

    h-index

1–5