Concepedia

Lineage-resolved Transcriptomics

Lineage-Resolved Transcriptomics is a temporal transcriptomics approach that distinguishes gene expression dynamics across distinct cellular lineages by integrating lineage-tracing data with single-cell RNA sequencing to resolve transcriptional trajectories specific to progenitor-descendant relationships.

105

Publications

22.6K

Citations

946

Authors

313

Institutions

Publications per year

2017–2026

87

Parents

Publications

105

Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics

Kelly Street, Davide Risso, Russell B. Fletcher et al. · BMC Genomics · 2018 · 3.4K citations · Full text

, , +17

Single-cell transcriptional diversity is a hallmark of developmental potential

Gunsagar S. Gulati, Shaheen S. Sikandar, Daniel J. Wesche et al. · Science · 2020 · 1.6K citations · Full text

, , +17

Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq

Barbara Treutlein, Douglas Brownfield, Angela Ruohao Wu et al. · Nature · 2014 · 1.5K citations · Full text

, , +14

Transcriptome-wide noise controls lineage choice in mammalian progenitor cells

Hannah Chang, Martin Hemberg, Mauricio Barahona et al. · Nature · 2008 · 1.2K citations · Full text

, , +14

Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos

Sophie Petropoulos, Daniel Edsgärd, Björn Reinius et al. · Cell · 2016 · 1.1K citations · Full text

, , +17

1–5 of 105

Authors

946

  1. AM
    Allon M. Klein

    Harvard University, United States

    4 publications · 1.7K citations

    4

    h-index

  2. NY
    Nir Yosef

    University of California, Berkeley, United States

    2 publications · 3.7K citations

    3

    h-index

  3. DE
    Daniel E. Wagner

    Howard Hughes Medical Institute, United States

    3 publications · 1.6K citations

    3

    h-index

  4. SR
    Stephen R. Quake

    Stanford University, United States

    3 publications · 1.9K citations

    3

    h-index

  5. DW
    Dong Won Kim

    Johns Hopkins University, United States

    3 publications · 259 citations

    3

    h-index

1–5 of 946

Institutions

313

  1. Harvard University

    Cambridge, United States

    11 h-index

    64 publications

    17.3K citations

  2. Stanford University

    Stanford, United States

    7 h-index

    43 publications

    39.4K citations

  3. Karolinska Institutet

    Stockholm, Sweden

    6 h-index

    43 publications

    15.6K citations

  4. Broad Institute

    Cambridge, United States

    6 h-index

    28 publications

    2.8K citations

  5. Johns Hopkins University

    Baltimore, United States

    6 h-index

    36 publications

    2.9K citations

  6. Howard Hughes Medical Institute

    Chevy Chase, United States

    6 h-index

    18 publications

    14.7K citations

  7. Harvard Stem Cell Institute

    Cambridge, United States

    5 h-index

    16 publications

    2.7K citations

  8. University of California, Berkeley

    Berkeley, United States

    5 h-index

    16 publications

    25.8K citations

1–8 of 313

Venues

  1. Nature Communications

    14 publications · 2.2K citations

    14

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 8 publications · 542 citations

    9

    h-index

  3. Science

    6 publications · 4.5K citations

    7

    h-index

  4. eLife

    7 publications · 783 citations

    7

    h-index

  5. Cell Reports

    5 publications · 225 citations

    5

    h-index

1–5