Concepedia

Kinetic Network Models

Kinetic Network Model is a computational framework that represents protein conformational dynamics as a graph-based Markov process, where nodes correspond to metastable conformational states and edges encode transition probabilities derived from kinetic data, enabling the quantitative modeling of time-dependent structural transitions in biomolecules.

184

Publications

9.7K

Citations

523

Authors

288

Institutions

Publications per year

2017–2026

44

Variants

Kinetic Network Model

Parents

Publications

184

Identification of slow molecular order parameters for Markov model construction

The Journal of Chemical Physics · 2013 · 1K citations · Full text

, , +14

Identification of slow molecular order parameters for Markov model construction

Fabian Paul, Toni Giorgino, Gianni De Fabritiis · 2013 · 722 citations · Full text

, , +14

Predicting perturbation patterns from the topology of biological networks

Marc Santolini, Albert-Ĺaszló Barabási · Proceedings of the National Academy of Sciences · 2018 · 339 citations · Full text

, , +10

Large Amplitude Conformational Change in Proteins Explored with a Plastic Network Model: Adenylate Kinase

Paul Maragakis, Martin Karplus · Journal of Molecular Biology · 2005 · 338 citations

, , +17

The dynamics of chimera states in heterogeneous Kuramoto networks

Carlo R. Laing · Physica D Nonlinear Phenomena · 2009 · 330 citations

, , +12

1–5 of 184

Authors

523

  1. XH
    Xuhui Huang

    Hong Kong University of Science and Technology, Hong Kong SAR China

    7 publications · 238 citations

    7

    h-index

  2. DJ
    David J. Wales

    University of Cambridge, United Kingdom

    6 publications · 169 citations

    6

    h-index

  3. RM
    Ronald M. Levy

    Rutgers, The State University of New Jersey, United States

    5 publications · 383 citations

    5

    h-index

  4. MA
    Michael Andrec

    Rutgers, The State University of New Jersey, United States

    4 publications · 326 citations

    4

    h-index

  5. DS
    David S. Soong

    University of California, Berkeley, United States

    4 publications · 88 citations

    4

    h-index

1–5 of 523

Institutions

288

  1. Harvard University

    Cambridge, United States

    7 h-index

    12 publications

    1.6K citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    7 h-index

    14 publications

    578 citations

  3. University of California, Berkeley

    Berkeley, United States

    6 h-index

    13 publications

    346 citations

  4. Hong Kong University of Science and Technology

    Hong Kong, Hong Kong

    6 h-index

    23 publications

    874 citations

  5. Rutgers, The State University of New Jersey

    New Brunswick, United States

    5 h-index

    21 publications

    1.6K citations

  6. Massachusetts Institute of Technology

    Cambridge, United States

    5 h-index

    10 publications

    292 citations

  7. KU Leuven

    Leuven, Belgium

    4 h-index

    6 publications

    211 citations

  8. Saha Institute of Nuclear Physics

    Kolkata, India

    4 h-index

    8 publications

    843 citations

1–8 of 288

Venues

  1. The Journal of Physical Chemistry B

    11 publications · 293 citations

    11

    h-index

  2. The Journal of Chemical Physics

    9 publications · 1.3K citations

    9

    h-index

  3. Proceedings of the National Academy of Sciences

    PNAS · 8 publications · 1.2K citations

    8

    h-index

  4. PLoS Computational Biology

    7 publications · 249 citations

    7

    h-index

  5. Bioinformatics

    7 publications · 282 citations

    7

    h-index

1–5