Concepedia

Hi-c-based Phasing

Hi-C-Based Phasing is a genome phasing method that uses Hi-C chromatin interaction data to link and assign heterozygous variants to their respective parental haplotypes by leveraging spatial proximity information within diploid genomes.

6

Publications

3.7K

Citations

55

Authors

19

Institutions

Publications per year

2017–2026

4

Parents

Publications

6

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

Maxim Imakaev, Geoffrey Fudenberg, Rachel Patton McCord et al. · Nature Methods · 2012 · 1.6K citations · Full text

, , +15

Hi–C: A comprehensive technique to capture the conformation of genomes

Jon-Matthew Belton, Rachel Patton McCord, Johan H. Gibcus et al. · Methods · 2012 · 1.3K citations · Full text

, , +10

Comparison of computational methods for Hi-C data analysis

Mattia Forcato, Chiara Nicoletti, Koustav Pal et al. · Nature Methods · 2017 · 357 citations · Full text

, , +9

Identifying statistically significant chromatin contacts from Hi-C data with FitHiC2

Arya Kaul, Sourya Bhattacharyya, Ferhat Ay · Nature Protocols · 2020 · 247 citations · Full text

, , +14

Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C

Zev Kronenberg, Arang Rhie, Sergey Koren et al. · Nature Communications · 2021 · 134 citations · Full text

, , +17

1–5 of 6

Authors

55

  1. RP
    Rachel Patton McCord

    University of Tennessee at Knoxville, United States

    2 publications · 2.9K citations

    2

    h-index

  2. JD
    Job Dekker

    University of Massachusetts Chan Medical School, United States

    2 publications · 2.9K citations

    2

    h-index

  3. NM
    N. M. Naumova

    University of Michigan, United States

    2 publications · 2.9K citations

    2

    h-index

  4. CC
    Christopher Cavanaugh

    University of Washington, United States

    1 publications · 31 citations

    1

    h-index

  5. GT
    Gregory T. Concepcion

    Pacific Biosciences (United States), United States

    1 publications · 134 citations

    1

    h-index

1–5 of 55

Institutions

19

  1. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    3 publications

    299 citations

  2. University of Washington

    Seattle, United States

    2 h-index

    18 publications

    867 citations

  3. University of Massachusetts Chan Medical School

    Worcester, United States

    2 h-index

    10 publications

    14.4K citations

  4. Harvard University

    Cambridge, United States

    2 h-index

    3 publications

    3.5K citations

  5. The University of Adelaide

    Adelaide, Australia

    1 h-index

    3 publications

    402 citations

  6. Rockefeller University

    New York, United States

    1 h-index

    2 publications

    268 citations

  7. La Jolla Bioengineering Institute

    San Diego, United States

    1 h-index

    1 publications

    247 citations

  8. Università Cattolica del Sacro Cuore

    Milan, Italy

    1 h-index

    1 publications

    134 citations

1–8 of 19

Venues

  1. Methods

    2 publications · 1.4K citations

    2

    h-index

  2. Nature Methods

    2 publications · 2K citations

    2

    h-index

  3. Nature Communications

    1 publications · 134 citations

    1

    h-index

  4. Nature Protocols

    1 publications · 247 citations

    1

    h-index

1–4